C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004GS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005974-ENSDARG00000005974 CGP 7955 6:19347557-19365601
GeneTranscriptPositionBiotype
ENSDARG00000059469 (tefm)
transcription elongation factor, mitochondrial 		ENSDART00000082693 (tefm-001) 19350202-19355573 protein_coding
ENSDART00000131033 (tefm-201) 19350296-19357889 protein_coding
ENSDART00000151267 (tefm-002) 19350257-19352563 processed_transcript
ENSDART00000151379 (tefm-003) 19350192-19352971 retained_intron
ENSDARG00000091057 (AL954746.1)
Uncharacterized protein 		ENSDART00000123795 (AL954746.1-201) 19346306-19350099 protein_coding
CIL_0004GS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176208-ENSG00000172171 CGP 9606 17:30831970-30906820
GeneTranscriptPositionBiotype
ENSG00000176208 (ATAD5)
ATPase family, AAA domain containing 5 		ENST00000321990 (ATAD5-001) 30831970-30895869 protein_coding
ENST00000578295 (ATAD5-002) 30831970-30876439 non_stop_decay
ENST00000585133 (ATAD5-003) 30835209-30869852 retained_intron
ENSG00000184060 (ADAP2)
ArfGAP with dual PH domains 2 		ENST00000330889 (ADAP2-001) 30921680-30959322 protein_coding
ENST00000470962 (ADAP2-002) 30954254-30958141 retained_intron
ENST00000480980 (ADAP2-003) 30954240-30956728 retained_intron
ENST00000580525 (ADAP2-005) 30921932-30958220 protein_coding
ENST00000580526 (ADAP2-009) 30921948-30949330 nonsense_mediated_decay
ENST00000581285 (ADAP2-008) 30921935-30956442 protein_coding
ENST00000581548 (ADAP2-007) 30921917-30949338 protein_coding
ENST00000583688 (ADAP2-006) 30906344-30921760 processed_transcript
ENST00000584828 (ADAP2-010) 30945028-30958339 protein_coding
ENST00000584989 (ADAP2-011) 30945042-30956362 protein_coding
ENST00000585130 (ADAP2-004) 30921680-30958739 nonsense_mediated_decay
ENSG00000212190 (RNU6-298P)
RNA, U6 small nuclear 298, pseudogene 		ENST00000390888 (RNU6-298P-201) 30861843-30861938 snRNA
ENSG00000263531 (RP13-753N3.1)
 ENST00000584157 (RP13-753N3.1-001) 30863921-30864940 antisense
ENSG00000265334 (CTD-2349P21.11)
 ENST00000580873 (CTD-2349P21.11-001) 30834325-30863028 antisense
ENSG00000275185 (RP13-753N3.3)
 ENST00000614165 (RP13-753N3.3-001) 30899110-30899651 antisense
CIL_0004GS_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017550-ENSMUSG00000046909 CGP 10090 11:80089400-80142175
GeneTranscriptPositionBiotype
ENSMUSG00000017550 (Atad5)
ATPase family, AAA domain containing 5 		ENSMUST00000017694 (Atad5-201) 80089400-80135791 protein_coding
ENSMUST00000108239 (Atad5-001) 80089400-80135794 protein_coding
ENSMUST00000151815 (Atad5-002) 80101884-80135794 processed_transcript
ENSMUST00000154168 (Atad5-003) 80103003-80108508 retained_intron
ENSMUSG00000046909 (Tefm)
transcription elongation factor, mitochondrial 		ENSMUST00000050207 (Tefm-001) 80136678-80142175 protein_coding
ENSMUST00000131601 (Tefm-002) 80137946-80142143 protein_coding
ENSMUST00000136996 (Tefm-003) 80136678-80139909 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GS_0001ENSDARG00000059469ENSDART00000082693ENSDART00000131033ENSDART00000151267ENSDART00000151379ENSDARG00000091057ENSDART00000123795CIL_0004GS_0002ENSG00000176208ENST00000321990ENST00000578295ENST00000585133ENSG00000184060ENST00000330889ENST00000470962ENST00000480980ENST00000580525ENST00000580526ENST00000581285ENST00000581548ENST00000583688ENST00000584828ENST00000584989ENST00000585130ENSG00000212190ENST00000390888ENSG00000263531ENST00000584157ENSG00000265334ENST00000580873ENSG00000275185ENST00000614165CIL_0004GS_0003ENSMUSG00000017550ENSMUST00000017694ENSMUST00000108239ENSMUST00000151815ENSMUST00000154168ENSMUSG00000046909ENSMUST00000050207ENSMUST00000131601ENSMUST00000136996
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GS_0001ENSDARG00000059469ENSDART00000082693ENSDART00000131033ENSDARG00000091057ENSDART00000123795CIL_0004GS_0002ENSG00000176208ENST00000321990ENST00000578295ENST00000585133ENSG00000184060ENST00000330889ENST00000580525ENST00000580526ENST00000581285ENST00000581548ENSG00000212190ENST00000390888ENSG00000263531ENST00000584157ENSG00000265334ENST00000580873ENSG00000275185ENST00000614165CIL_0004GS_0003ENSMUSG00000017550ENSMUST00000017694ENSMUST00000108239ENSMUST00000151815ENSMUSG00000046909ENSMUST00000050207ENSMUST00000131601ENSMUST00000136996
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059469 ENSDART00000082693 N/A N/A N/A 1.501±0.51 N/A N/A 2.731±0.09 1.565±0.00 0.195±0.00 N/A 1.894±0.00 N/A N/A N/A
ENSDART00000131033 N/A N/A N/A 1.295±0.53 N/A N/A 1.338±0.21 1.440±0.24 0.200±0.00 N/A 0.641±0.00 N/A N/A N/A
ENSDART00000151267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000091057 ENSDART00000123795 N/A N/A N/A 0.278±0.14 N/A N/A 1.381±0.36 1.231±0.00 0.175±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176208 ENST00000321990 N/A 0.535±0.00 0.165±0.00 0.136±0.04 0.575±0.23 N/A 0.180±0.00 0.162±0.05 0.092±0.00 0.169±0.00 N/A 1.119±0.94 0.323±0.35 1.064±0.41
ENST00000578295 N/A N/A N/A N/A 0.348±0.00 0.451±0.00 0.078±0.00 N/A N/A N/A N/A 1.472±0.00 N/A N/A
ENST00000585133 N/A N/A N/A 0.232±0.00 N/A 0.049±0.00 0.053±0.00 N/A N/A N/A N/A N/A 0.137±0.00 N/A
ENSG00000184060 ENST00000330889 2.398±0.00 4.785±0.00 N/A 1.515±0.00 2.508±0.47 1.155±0.31 N/A 3.741±0.00 1.695±0.00 1.830±1.24 0.248±0.00 1.740±0.44 8.023±0.76 1.514±0.00
ENST00000470962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580525 2.921±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.085±0.00 N/A N/A N/A N/A
ENST00000580526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.240±0.00 N/A
ENST00000581285 N/A N/A N/A N/A 2.248±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.492±0.00 N/A N/A
ENST00000583688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212190 ENST00000390888 N/A 1.709±0.00 N/A 0.417±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263531 ENST00000584157 0.014±0.00 0.949±0.00 N/A 0.213±0.18 0.280±0.00 0.036±0.00 0.043±0.02 0.230±0.06 N/A 0.046±0.00 N/A 0.164±0.03 0.107±0.01 0.117±0.02
ENSG00000265334 ENST00000580873 N/A N/A N/A N/A N/A 0.190±0.00 0.426±0.00 0.783±0.00 0.352±0.00 N/A 0.261±0.00 N/A N/A N/A
ENSG00000275185 ENST00000614165 N/A 4.934±0.00 6.180±0.00 2.725±0.00 N/A 5.193±1.27 5.064±0.00 5.903±0.51 6.928±3.32 N/A 3.148±0.56 8.176±0.71 N/A 4.790±1.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017550 ENSMUST00000017694 0.049±0.00 0.272±0.08 0.157±0.00 0.294±0.01 0.113±0.07 0.218±0.09 0.046±0.02 0.042±0.02 0.824±1.32 0.114±0.04 0.087±0.03 0.475±0.17 0.882±0.51 0.343±0.15
ENSMUST00000108239 0.050±0.00 0.391±0.09 0.171±0.00 0.729±0.52 0.140±0.09 0.237±0.10 0.046±0.02 0.043±0.02 1.183±1.44 0.137±0.06 0.089±0.04 0.508±0.16 0.878±0.41 0.117±0.00
ENSMUST00000151815 0.262±0.07 N/A 0.347±0.10 1.681±1.23 0.239±0.08 0.360±0.14 0.069±0.03 0.065±0.05 2.079±2.75 0.369±0.00 0.113±0.04 0.631±0.15 1.120±0.87 0.307±0.03
ENSMUST00000154168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046909 ENSMUST00000050207 3.582±0.71 1.226±0.45 5.701±0.09 3.409±0.48 2.917±1.01 1.847±0.64 7.062±0.72 5.138±0.34 4.468±1.68 2.388±0.30 7.857±0.77 2.960±1.25 8.461±3.45 1.848±0.29
ENSMUST00000131601 0.864±0.06 1.059±0.29 N/A 1.326±0.04 0.778±0.18 1.074±0.27 1.774±0.22 1.341±0.14 1.142±0.22 0.885±0.13 N/A 1.113±0.48 2.206±0.83 1.201±0.95
ENSMUST00000136996 N/A N/A N/A 1.074±0.24 N/A 0.706±0.00 N/A N/A 1.082±0.00 N/A N/A 1.698±0.63 2.619±0.00 0.767±0.33

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