C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type VIII, alpha 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000060893 col8a2 7955 - 19:37042052-37144567 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000086290 col8a2-201 37042052-37053700 protein_coding
  ENSDART00000136811 col8a2-001 37044642-37144567 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000086290ENSDART00000136811
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000086290 1.281±0.54 0.705±0.41 1.991±1.33 0.022±0.00 0.577±0.00
ENSDART00000136811 N/A 0.174±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JJ CIL_0004JJ_0001 CGP 19:37042052-37281761

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005581 IEA collagen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000171812 COL8A2 collagen, type VIII, alpha 2 protein_coding Homo_sapiens
ENSMUSG00000056174 Col8a2 collagen, type VIII, alpha 2 protein_coding Mus_musculus

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