C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004JJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060893-ENSDARG00000045364 CGP 7955 19:37042052-37281761
GeneTranscriptPositionBiotype
ENSDARG00000045364 (trappc3)
trafficking protein particle complex 3 		ENSDART00000066712 (trappc3-001) 37271262-37281761 protein_coding
ENSDARG00000060893 (col8a2)
collagen, type VIII, alpha 2 		ENSDART00000086290 (col8a2-201) 37042052-37053700 protein_coding
ENSDART00000136811 (col8a2-001) 37044642-37144567 protein_coding
CIL_0004JJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171812-ENSG00000054116 CGP 9606 1:36095236-36156053
GeneTranscriptPositionBiotype
ENSG00000116871 (MAP7D1)
MAP7 domain containing 1 		ENST00000316156 (MAP7D1-001) 36155965-36180849 protein_coding
ENST00000373148 (MAP7D1-003) 36177469-36180832 protein_coding
ENST00000373150 (MAP7D1-002) 36156198-36180849 protein_coding
ENST00000373151 (MAP7D1-009) 36156202-36180840 protein_coding
ENST00000429533 (MAP7D1-005) 36155579-36175008 protein_coding
ENST00000462118 (MAP7D1-008) 36171968-36173479 retained_intron
ENST00000474796 (MAP7D1-004) 36172469-36176834 processed_transcript
ENST00000487114 (MAP7D1-006) 36179021-36180315 retained_intron
ENST00000487131 (MAP7D1-013) 36176806-36179022 processed_transcript
ENST00000527764 (MAP7D1-012) 36156175-36171823 retained_intron
ENST00000530729 (MAP7D1-010) 36157215-36172540 protein_coding
ENST00000530975 (MAP7D1-015) 36176717-36178822 protein_coding
ENST00000532131 (MAP7D1-014) 36178411-36179724 retained_intron
ENSG00000171812 (COL8A2)
collagen, type VIII, alpha 2 		ENST00000303143 (COL8A2-001) 36095236-36100249 protein_coding
ENST00000397799 (COL8A2-003) 36095236-36125220 protein_coding
ENST00000481785 (COL8A2-002) 36097507-36100249 protein_coding
ENST00000615990 (COL8A2-201) 36097507-36100249 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JJ_0001ENSDARG00000045364ENSDART00000066712ENSDARG00000060893ENSDART00000086290ENSDART00000136811CIL_0004JJ_0002ENSG00000116871ENST00000316156ENST00000373148ENST00000373150ENST00000373151ENST00000429533ENST00000462118ENST00000474796ENST00000487114ENST00000487131ENST00000527764ENST00000530729ENST00000530975ENST00000532131ENSG00000171812ENST00000303143ENST00000397799ENST00000481785ENST00000615990
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JJ_0001ENSDARG00000045364ENSDART00000066712ENSDARG00000060893ENSDART00000086290ENSDART00000136811CIL_0004JJ_0002ENSG00000116871ENST00000316156ENST00000373148ENST00000373150ENST00000373151ENST00000532131ENSG00000171812ENST00000303143ENST00000397799
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045364 ENSDART00000066712 N/A N/A N/A 18.919±1.22 N/A N/A 9.293±3.98 8.265±3.17 1.073±0.00 N/A 5.370±0.00 N/A N/A N/A
ENSDARG00000060893 ENSDART00000086290 N/A N/A N/A 1.281±0.54 N/A N/A 0.705±0.41 1.991±1.33 0.022±0.00 N/A 0.577±0.00 N/A N/A N/A
ENSDART00000136811 N/A N/A N/A N/A N/A N/A 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116871 ENST00000316156 24.653±0.00 18.095±0.00 N/A 2.337±0.00 49.054±0.00 21.772±0.00 35.935±0.00 0.547±0.00 2.419±0.00 59.799±0.00 N/A 19.693±0.00 12.770±0.00 N/A
ENST00000373148 41.580±0.00 43.317±0.00 N/A 30.844±25.91 N/A N/A N/A 13.038±12.16 N/A N/A N/A 19.111±3.72 16.154±0.00 29.123±0.00
ENST00000373150 31.593±0.00 16.463±0.00 N/A 39.568±34.04 31.571±29.59 28.347±0.00 38.027±33.54 N/A 2.956±0.00 30.519±28.05 60.483±55.19 30.179±15.74 26.359±0.13 26.045±0.00
ENST00000373151 N/A 17.556±0.00 N/A N/A N/A N/A N/A 11.264±0.00 N/A 1.572±0.00 N/A 14.514±0.00 18.663±0.00 N/A
ENST00000429533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532131 N/A N/A N/A 196.863±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171812 ENST00000303143 N/A 4.042±0.00 N/A 0.967±0.00 2.057±1.89 0.580±0.41 N/A 0.382±0.00 2.335±0.00 N/A N/A 2.069±2.26 5.258±0.43 3.718±0.00
ENST00000397799 0.869±0.00 N/A N/A N/A N/A N/A 0.627±0.00 N/A N/A 1.596±0.00 N/A N/A 2.887±0.42 N/A
ENST00000481785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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