C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type VIII, alpha 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056174 Col8a2 10090 + 4:126286793-126314330 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070132 Col8a2-001 126286793-126314330 protein_coding
  ENSMUST00000128435 Col8a2-002 126300530-126309785 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070132
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070132 1.248±0.94 1.174±0.06 10.427±0.34 0.922±0.33 0.225±0.05 1.458±0.12 0.273±0.06 0.144±0.02 0.160±0.09 2.077±0.17 0.543±0.21 3.039±0.69 0.690±0.53 0.203±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005581 IEA collagen trimer
GO:0005604 IEA basement membrane
GO:0007155 IEA cell adhesion
GO:0031012 IEA extracellular matrix
GO:0048593 IGI camera-type eye morphogenesis
GO:0050673 IGI epithelial cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060893 col8a2 collagen, type VIII, alpha 2 protein_coding Danio_rerio
ENSG00000171812 COL8A2 collagen, type VIII, alpha 2 protein_coding Homo_sapiens

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