C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rab geranylgeranyltransferase, alpha subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000061024 rabggta 7955 + 23:1725582-1749518 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000099024 rabggta-201 1729378-1748349 protein_coding
  ENSDART00000149357 rabggta-001 1725582-1749518 protein_coding
  ENSDART00000149648 rabggta-002 1741951-1748460 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000099024ENSDART00000149357
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000099024 2.479±0.00 1.011±0.00 N/A N/A N/A
ENSDART00000149357 4.934±2.32 1.280±0.58 0.512±0.00 0.381±0.00 1.153±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004663 IEA Rab geranylgeranyltransferase activity
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008270 IEA zinc ion binding
GO:0008318 IEA protein prenyltransferase activity
GO:0018342 IEA protein prenylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100949 RABGGTA Rab geranylgeranyltransferase, alpha subunit protein_coding Homo_sapiens
ENSMUSG00000040472 Rabggta Rab geranylgeranyl transferase, a subunit protein_coding Mus_musculus

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