C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily C, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000061203 trpc1 7955 + 24:5924127-5953001 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000087034 trpc1-201 5924401-5952774 protein_coding
  ENSDART00000139191 trpc1-001 5924127-5953001 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000087034ENSDART00000139191
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000087034 N/A 0.121±0.07 N/A 0.036±0.00 0.313±0.00
ENSDART00000139191 10.563±0.29 N/A 0.062±0.00 N/A 0.571±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065B CIL_00065B_0001 CGP 24:5924127-5973257

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001570 IMP vasculogenesis
GO:0005216 IEA ion channel activity
GO:0005262 IEA calcium channel activity
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0046847 IMP filopodium assembly
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000144935 TRPC1 transient receptor potential cation channel, subfamily C, member 1 protein_coding Homo_sapiens
ENSMUSG00000032839 Trpc1 transient receptor potential cation channel, subfamily C, member 1 protein_coding Mus_musculus

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