C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: armadillo repeat gene deleted in velocardiofacial syndrome b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000061688 arvcfb 7955 - 5:27907677-28210984 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000088222 arvcfb-201 27913572-28050012 protein_coding
  ENSDART00000133823 arvcfb-004 27928725-27967686 protein_coding
  ENSDART00000144035 arvcfb-002 28032192-28110718 protein_coding
  ENSDART00000146070 arvcfb-001 27907677-28210984 protein_coding
  ENSDART00000147505 arvcfb-003 27966766-28000527 processed_transcript
  ENSDART00000148608 arvcfb-006 27909968-27928825 protein_coding
  ENSDART00000148656 arvcfb-005 27925849-27974862 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENSDART00000088222ENSDART00000146070
Transcript ID Brain Liver Muscle
ENSDART00000088222 5.642±0.00 0.177±0.00 0.682±0.00
ENSDART00000146070 3.297±0.00 0.052±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HK CIL_0006HK_0001 CGP 5:27907677-28367225

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000099889 ARVCF armadillo repeat gene deleted in velocardiofacial syndrome protein_coding Homo_sapiens
ENSMUSG00000000325 Arvcf armadillo repeat gene deleted in velo-cardio-facial syndrome protein_coding Mus_musculus

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