C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006HK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061688-ENSDARG00000056550 CGP 7955 5:27907677-28367225
GeneTranscriptPositionBiotype
ENSDARG00000056550 (tango2)
transport and golgi organization 2 homolog (Drosophila) 		ENSDART00000079064 (tango2-001) 28331188-28367225 protein_coding
ENSDARG00000061688 (arvcfb)
armadillo repeat gene deleted in velocardiofacial syndrome b 		ENSDART00000088222 (arvcfb-201) 27913572-28050012 protein_coding
ENSDART00000133823 (arvcfb-004) 27928725-27967686 protein_coding
ENSDART00000144035 (arvcfb-002) 28032192-28110718 protein_coding
ENSDART00000146070 (arvcfb-001) 27907677-28210984 protein_coding
ENSDART00000147505 (arvcfb-003) 27966766-28000527 processed_transcript
ENSDART00000148608 (arvcfb-006) 27909968-27928825 protein_coding
ENSDART00000148656 (arvcfb-005) 27925849-27974862 protein_coding
ENSDARG00000094771 (si:dkey-104k17.1)
si:dkey-104k17.1 		ENSDART00000143561 (si:dkey-104k17.1-001) 28123777-28126086 processed_transcript
ENSDART00000147675 (si:dkey-104k17.1-002) 28124223-28125850 processed_transcript

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006HK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099889-ENSG00000183597 CGP 9606 22:19969896-20065926
GeneTranscriptPositionBiotype
ENSG00000099889 (ARVCF)
armadillo repeat gene deleted in velocardiofacial syndrome 		ENST00000263207 (ARVCF-001) 19969896-20016808 protein_coding
ENST00000401994 (ARVCF-011) 19971228-19987093 protein_coding
ENST00000406259 (ARVCF-013) 19971228-19990794 protein_coding
ENST00000406522 (ARVCF-012) 19971228-19987093 protein_coding
ENST00000462319 (ARVCF-007) 19981545-19983753 processed_transcript
ENST00000467828 (ARVCF-004) 19981991-20016745 processed_transcript
ENST00000473551 (ARVCF-003) 19979997-19990792 retained_intron
ENST00000480792 (ARVCF-009) 19973162-19975762 processed_transcript
ENST00000487793 (ARVCF-005) 19981152-19987190 processed_transcript
ENST00000492625 (ARVCF-006) 19981382-19987155 processed_transcript
ENST00000495096 (ARVCF-002) 19969898-19979416 retained_intron
ENSG00000183597 (TANGO2)
transport and golgi organization 2 homolog (Drosophila) 		ENST00000327374 (TANGO2-003) 20021108-20065926 protein_coding
ENST00000398042 (TANGO2-007) 20021072-20065926 protein_coding
ENST00000399807 (TANGO2-004) 20021089-20065862 nonsense_mediated_decay
ENST00000401833 (TANGO2-005) 20021139-20065364 protein_coding
ENST00000401886 (TANGO2-001) 20017014-20065358 protein_coding
ENST00000411907 (TANGO2-010) 20021069-20061656 processed_transcript
ENST00000420290 (TANGO2-201) 20021069-20065925 protein_coding
ENST00000430807 (TANGO2-012) 20021127-20063421 nonsense_mediated_decay
ENST00000432198 (TANGO2-006) 20017031-20052584 protein_coding
ENST00000432883 (TANGO2-202) 20021069-20065925 protein_coding
ENST00000434168 (TANGO2-014) 20021155-20063411 protein_coding
ENST00000434570 (TANGO2-203) 20021069-20065925 protein_coding
ENST00000444651 (TANGO2-015) 20036759-20064907 nonsense_mediated_decay
ENST00000447208 (TANGO2-204) 20021069-20065925 protein_coding
ENST00000450019 (TANGO2-002) 20021107-20065264 nonsense_mediated_decay
ENST00000450664 (TANGO2-011) 20021102-20061576 protein_coding
ENST00000456048 (TANGO2-205) 20021069-20065925 protein_coding
ENST00000462579 (TANGO2-019) 20036759-20061802 retained_intron
ENST00000471707 (TANGO2-018) 20017014-20056204 retained_intron
ENST00000475446 (TANGO2-009) 20017031-20048180 processed_transcript
ENST00000476940 (TANGO2-020) 20063573-20064929 processed_transcript
ENST00000479679 (TANGO2-008) 20021122-20053542 processed_transcript
ENST00000484373 (TANGO2-021) 20036760-20056241 retained_intron
ENST00000485715 (TANGO2-013) 20036760-20063383 processed_transcript
ENST00000490121 (TANGO2-017) 20055943-20061227 processed_transcript
ENST00000490583 (TANGO2-016) 20053435-20064959 processed_transcript
ENSG00000268292 (AC006547.15)
 ENST00000600090 (AC006547.15-001) 20064552-20065705 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HK_0001ENSDARG00000056550ENSDART00000079064ENSDARG00000061688ENSDART00000088222ENSDART00000133823ENSDART00000144035ENSDART00000146070ENSDART00000147505ENSDART00000148608ENSDART00000148656ENSDARG00000094771ENSDART00000143561ENSDART00000147675CIL_0006HK_0002ENSG00000099889ENST00000263207ENST00000401994ENST00000406259ENST00000406522ENST00000462319ENST00000467828ENST00000473551ENST00000480792ENST00000487793ENST00000492625ENST00000495096ENSG00000183597ENST00000327374ENST00000398042ENST00000399807ENST00000401833ENST00000401886ENST00000411907ENST00000420290ENST00000430807ENST00000432198ENST00000432883ENST00000434168ENST00000434570ENST00000444651ENST00000447208ENST00000450019ENST00000450664ENST00000456048ENST00000462579ENST00000471707ENST00000475446ENST00000476940ENST00000479679ENST00000484373ENST00000485715ENST00000490121ENST00000490583ENSG00000268292ENST00000600090
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HK_0001ENSDARG00000056550ENSDART00000079064ENSDARG00000061688ENSDART00000088222ENSDART00000146070ENSDARG00000094771ENSDART00000143561ENSDART00000147675CIL_0006HK_0002ENSG00000099889ENST00000263207ENST00000406522ENST00000495096ENSG00000183597ENST00000327374ENST00000398042ENST00000399807ENST00000401833ENST00000401886ENST00000411907ENST00000420290ENST00000432883ENST00000444651ENST00000450019ENST00000450664ENST00000456048ENST00000462579ENST00000484373ENST00000490583ENSG00000268292ENST00000600090
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056550 ENSDART00000079064 N/A N/A N/A 3.665±1.35 N/A N/A 9.155±3.42 7.315±1.10 2.087±0.00 N/A 3.178±0.00 N/A N/A N/A
ENSDARG00000061688 ENSDART00000088222 N/A N/A N/A 5.642±0.00 N/A N/A N/A N/A 0.177±0.00 N/A 0.682±0.00 N/A N/A N/A
ENSDART00000133823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146070 N/A N/A N/A 3.297±0.00 N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A
ENSDART00000147505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000094771 ENSDART00000143561 N/A N/A N/A 0.130±0.00 N/A N/A 1.096±0.44 0.589±0.26 N/A N/A N/A N/A N/A N/A
ENSDART00000147675 N/A N/A N/A 0.104±0.02 N/A N/A 0.306±0.14 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099889 ENST00000263207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.011±0.00
ENST00000401994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.333±0.00
ENST00000462319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.609±0.00 18.404±0.00 N/A 5.695±0.00
ENSG00000183597 ENST00000327374 1.300±0.00 2.543±0.00 N/A 2.664±0.00 3.678±0.00 1.426±0.00 0.481±0.00 3.373±0.00 N/A 1.695±0.00 N/A 2.346±0.89 2.565±1.01 N/A
ENST00000398042 N/A N/A N/A 0.867±0.00 N/A N/A N/A 2.060±0.00 N/A N/A 1.930±0.00 1.555±0.00 2.326±0.87 1.882±0.00
ENST00000399807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.880±0.00 N/A 2.585±0.00
ENST00000401833 N/A N/A N/A N/A N/A N/A 6.970±0.00 N/A N/A N/A 0.989±0.00 2.382±0.00 N/A N/A
ENST00000401886 N/A N/A 0.909±0.00 N/A 1.114±0.00 N/A N/A 0.341±0.00 N/A N/A N/A N/A N/A N/A
ENST00000411907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.274±0.00 6.852±0.00 N/A N/A
ENST00000420290 N/A N/A N/A N/A N/A N/A 6.774±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000430807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432883 1.278±0.00 3.269±0.00 N/A 2.899±0.72 N/A 2.194±0.00 0.835±0.00 3.182±0.00 1.706±0.00 N/A 1.391±0.00 3.004±0.00 3.472±1.16 N/A
ENST00000434168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444651 N/A N/A 1.633±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450019 N/A N/A N/A 0.737±0.00 N/A N/A N/A N/A N/A N/A N/A 0.613±0.00 N/A N/A
ENST00000450664 N/A N/A N/A N/A N/A N/A N/A 0.683±0.00 N/A N/A 3.123±0.00 N/A 9.827±0.00 N/A
ENST00000456048 N/A 2.463±0.00 N/A N/A N/A 1.508±0.00 0.439±0.00 N/A N/A 2.711±0.00 N/A 2.160±0.00 1.471±0.13 2.550±0.67
ENST00000462579 N/A N/A N/A N/A N/A N/A N/A N/A 2.209±0.00 2.906±0.00 1.762±0.00 N/A N/A N/A
ENST00000471707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484373 N/A N/A 0.382±0.00 N/A N/A N/A N/A N/A N/A 0.833±0.00 N/A N/A N/A N/A
ENST00000485715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490583 N/A N/A N/A N/A N/A N/A N/A 2.206±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000268292 ENST00000600090 7.996±0.00 13.166±0.00 N/A 6.446±3.58 11.045±0.00 5.249±0.00 15.500±13.67 12.133±0.00 4.030±1.31 9.818±0.00 3.508±1.14 7.485±0.08 10.928±1.24 7.896±0.00

Loading