C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterogeneous nuclear ribonucleoprotein M
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000061735 hnrnpm 7955 + 22:17755107-17765364 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000088356 hnrnpm-201 17755301-17765147 protein_coding
  ENSDART00000137689 hnrnpm-001 17755107-17765364 protein_coding
  ENSDART00000142871 hnrnpm-003 17755111-17758094 retained_intron
  ENSDART00000149531 hnrnpm-002 17761076-17763199 protein_coding
  ENSDART00000150120 hnrnpm-004 17763250-17765144 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000137689ENSDART00000142871ENSDART00000150120
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000137689 53.055±2.32 28.766±18.22 28.571±14.65 6.165±0.00 17.775±0.00
ENSDART00000142871 N/A 5.687±3.98 6.872±0.00 N/A N/A
ENSDART00000150120 60.383±0.00 36.127±0.00 N/A 4.736±0.00 20.567±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GY CIL_0005GY_0001 CGP 22:17733509-17765364

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000398 IEA mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000099783 HNRNPM heterogeneous nuclear ribonucleoprotein M protein_coding Homo_sapiens
ENSMUSG00000059208 Hnrnpm heterogeneous nuclear ribonucleoprotein M protein_coding Mus_musculus

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