C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005GY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061738-ENSDARG00000061735 CGP 7955 22:17733509-17765364
GeneTranscriptPositionBiotype
ENSDARG00000061738 (march2)
membrane-associated ring finger (C3HC4) 2
ENSDART00000088419 (march2-001) 17733509-17745380 protein_coding
CIL_0005GY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099785-ENSG00000099783 CGP 9606 19:8413270-8489114
GeneTranscriptPositionBiotype
ENSG00000066044 (ELAVL1)
ELAV like RNA binding protein 1
ENST00000351593 (ELAVL1-201) 7962275-8445041 protein_coding
ENST00000407627 (ELAVL1-001) 7958579-8005608 protein_coding
ENST00000593807 (ELAVL1-005) 7963630-8005659 protein_coding
ENST00000595499 (ELAVL1-006) 7972888-7973785 retained_intron
ENST00000596154 (ELAVL1-004) 7960917-7981112 protein_coding
ENST00000596459 (ELAVL1-002) 7963159-8002203 protein_coding
ENSG00000099783 (HNRNPM)
heterogeneous nuclear ribonucleoprotein M
ENST00000325495 (HNRNPM-002) 8444958-8489114 protein_coding
ENST00000348943 (HNRNPM-001) 8444767-8489114 protein_coding
ENST00000593293 (HNRNPM-014) 8461969-8465372 retained_intron
ENST00000594907 (HNRNPM-017) 8444992-8485724 protein_coding
ENST00000596295 (HNRNPM-012) 8485862-8488946 protein_coding
ENST00000596984 (HNRNPM-010) 8444993-8467582 protein_coding
ENST00000597081 (HNRNPM-016) 8481469-8487082 processed_transcript
ENST00000597270 (HNRNPM-007) 8466249-8486273 protein_coding
ENST00000597813 (HNRNPM-013) 8444920-8463852 retained_intron
ENST00000598367 (HNRNPM-008) 8463497-8474244 protein_coding
ENST00000598603 (HNRNPM-011) 8482549-8485723 retained_intron
ENST00000598999 (HNRNPM-015) 8486158-8487184 protein_coding
ENST00000600092 (HNRNPM-003) 8444971-8485648 protein_coding
ENST00000600806 (HNRNPM-004) 8444977-8489110 nonsense_mediated_decay
ENST00000601645 (HNRNPM-009) 8444994-8471410 protein_coding
ENST00000602219 (HNRNPM-006) 8487302-8489110 processed_transcript
ENST00000620401 (HNRNPM-201) 8444990-8489110 protein_coding
ENSG00000099785 (MARCH2)
membrane-associated ring finger (C3HC4) 2, E3 ubiquitin protein ligase
ENST00000215555 (MARCH2-201) 8413303-8439011 protein_coding
ENST00000381035 (MARCH2-002) 8413270-8439004 protein_coding
ENST00000594796 (MARCH2-007) 8421927-8430892 retained_intron
ENST00000595142 (MARCH2-003) 8413290-8426668 protein_coding
ENST00000595213 (MARCH2-004) 8413422-8422009 protein_coding
ENST00000601283 (MARCH2-005) 8413305-8438731 protein_coding
ENST00000601724 (MARCH2-006) 8413295-8426673 protein_coding
ENST00000602117 (MARCH2-001) 8418405-8439017 protein_coding
ENSG00000268931 (RP11-886P16.6)
ENST00000595706 (RP11-886P16.6-001) 8423355-8427827 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GY_0001ENSDARG00000061738ENSDART00000088419CIL_0005GY_0002ENSG00000066044ENST00000351593ENST00000407627ENST00000593807ENST00000595499ENST00000596154ENST00000596459ENSG00000099783ENST00000325495ENST00000348943ENST00000593293ENST00000594907ENST00000596295ENST00000596984ENST00000597081ENST00000597270ENST00000597813ENST00000598367ENST00000598603ENST00000598999ENST00000600092ENST00000600806ENST00000601645ENST00000602219ENST00000620401ENSG00000099785ENST00000215555ENST00000381035ENST00000594796ENST00000595142ENST00000595213ENST00000601283ENST00000601724ENST00000602117ENSG00000268931ENST00000595706
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GY_0001ENSDARG00000061738ENSDART00000088419CIL_0005GY_0002ENSG00000066044ENST00000351593ENST00000407627ENST00000596459ENSG00000099783ENST00000325495ENST00000348943ENST00000594907ENST00000600092ENST00000600806ENSG00000099785ENST00000215555ENST00000381035ENST00000594796ENST00000601283ENST00000602117ENSG00000268931ENST00000595706
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061738 ENSDART00000088419 N/A N/A N/A 5.402±4.63 N/A N/A 2.940±0.00 N/A 0.674±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000066044 ENST00000351593 26.929±0.00 24.575±0.00 2.822±0.00 N/A 13.298±7.47 14.335±10.27 18.980±0.00 18.497±11.31 14.417±0.00 21.367±13.98 22.305±0.00 32.796±18.30 36.326±7.79 54.309±16.84
ENST00000407627 N/A N/A N/A 6.060±0.00 N/A N/A N/A N/A N/A N/A 0.550±0.00 N/A N/A N/A
ENST00000593807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596459 N/A N/A 4.242±0.00 N/A N/A 5.286±0.00 2.038±0.00 N/A N/A N/A 3.295±0.00 7.004±0.00 N/A N/A
ENSG00000099783 ENST00000325495 39.749±0.00 64.489±0.00 3.112±0.00 23.180±20.29 24.903±18.01 21.707±15.37 14.411±13.60 28.722±22.68 9.524±2.12 20.488±14.54 14.810±0.00 56.451±34.07 54.716±19.83 56.068±4.58
ENST00000348943 34.645±0.00 37.410±0.00 N/A 20.382±0.00 20.362±0.00 27.558±0.00 13.919±0.00 32.055±0.00 N/A N/A 16.228±0.00 47.145±15.05 27.811±6.34 46.874±0.00
ENST00000593293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594907 N/A N/A 3.887±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600092 N/A N/A 3.162±0.00 2.956±0.00 N/A 4.099±0.00 1.865±0.00 N/A 7.310±0.00 7.220±0.00 N/A N/A N/A N/A
ENST00000600806 N/A N/A N/A 1.864±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000099785 ENST00000215555 36.944±0.00 20.723±0.00 N/A 28.154±22.38 37.013±33.45 26.853±25.45 22.199±18.29 13.152±0.00 9.040±7.57 14.697±13.81 20.344±15.65 10.755±5.62 22.809±9.41 13.456±10.39
ENST00000381035 N/A N/A N/A N/A N/A 0.485±0.00 N/A N/A N/A 0.587±0.00 N/A N/A N/A N/A
ENST00000594796 28.619±0.00 28.756±0.00 3.966±0.00 N/A 23.647±21.76 3.536±0.00 N/A 3.829±0.00 3.510±0.00 N/A 3.157±0.00 1.423±0.00 N/A N/A
ENST00000595142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.212±0.00 N/A N/A
ENST00000601724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602117 N/A N/A N/A 1.266±0.00 N/A N/A N/A 2.316±0.00 N/A N/A N/A 1.128±0.00 4.492±0.00 1.037±0.00
ENSG00000268931 ENST00000595706 0.506±0.00 0.901±0.00 N/A 0.590±0.00 0.816±0.00 0.282±0.03 0.212±0.01 0.344±0.00 0.134±0.00 0.309±0.00 0.032±0.00 0.251±0.14 0.084±0.00 0.267±0.18

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