C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type XV, alpha 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000061848 col15a1b 7955 + 2:23850886-23927192 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000088643 col15a1b-201 23884340-23926322 protein_coding
  ENSDART00000111483 col15a1b-202 23877815-23884804 protein_coding
  ENSDART00000137065 col15a1b-001 23850886-23927192 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000088643ENSDART00000137065
Transcript ID Brain Heart Kidney Muscle
ENSDART00000088643 N/A 0.204±0.00 N/A N/A
ENSDART00000137065 0.732±0.48 2.098±1.57 0.645±0.59 3.650±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BK CIL_0007BK_0001 CGP 2:23850886-24008101

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001654 IMP eye development
GO:0005198 IEA structural molecule activity
GO:0005581 IEA collagen
GO:0007155 IEA cell adhesion
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000204291 COL15A1 collagen, type XV, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000028339 Col15a1 collagen, type XV, alpha 1 protein_coding Mus_musculus

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