C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007BK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061848-ENSDARG00000017494 CGP 7955 2:23850886-24008101
GeneTranscriptPositionBiotype
ENSDARG00000017494 (tgfbr1a)
transforming growth factor, beta receptor 1 a 		ENSDART00000121885 (tgfbr1a-001) 23932610-24008101 protein_coding
ENSDARG00000061848 (col15a1b)
collagen, type XV, alpha 1b 		ENSDART00000088643 (col15a1b-201) 23884340-23926322 protein_coding
ENSDART00000111483 (col15a1b-202) 23877815-23884804 protein_coding
ENSDART00000137065 (col15a1b-001) 23850886-23927192 protein_coding
CIL_0007BK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204291-ENSG00000106799 CGP 9606 9:98943179-99154192
GeneTranscriptPositionBiotype
ENSG00000106799 (TGFBR1)
transforming growth factor, beta receptor 1 		ENST00000374990 (TGFBR1-003) 99105111-99153649 protein_coding
ENST00000374994 (TGFBR1-001) 99105089-99154192 protein_coding
ENST00000546584 (TGFBR1-012) 99127934-99132739 protein_coding
ENST00000547314 (TGFBR1-008) 99104038-99132726 protein_coding
ENST00000548365 (TGFBR1-011) 99127874-99132703 protein_coding
ENST00000549021 (TGFBR1-010) 99127775-99138064 protein_coding
ENST00000549766 (TGFBR1-005) 99105150-99149528 nonsense_mediated_decay
ENST00000550253 (TGFBR1-007) 99127916-99149341 protein_coding
ENST00000552516 (TGFBR1-004) 99105150-99153658 protein_coding
ENST00000552573 (TGFBR1-009) 99104070-99132739 protein_coding
ENSG00000204291 (COL15A1)
collagen, type XV, alpha 1 		ENST00000375001 (COL15A1-001) 98943639-99070792 protein_coding
ENST00000467052 (COL15A1-002) 98943179-98944188 processed_transcript
ENST00000471477 (COL15A1-004) 98943639-98986453 retained_intron
ENST00000496686 (COL15A1-003) 99038673-99041377 retained_intron
ENST00000610452 (COL15A1-201) 98943713-99070792 protein_coding
ENSG00000252942 (RNA5SP290)
RNA, 5S ribosomal pseudogene 290 		ENST00000517133 (RNA5SP290-201) 99145840-99145966 rRNA
ENSG00000264740 (AL354923.1)
 ENST00000583374 (AL354923.1-201) 99074120-99074230 miRNA
CIL_0007BK_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028339-ENSMUSG00000007613 CGP 10090 4:47208161-47414931
GeneTranscriptPositionBiotype
ENSMUSG00000007613 (Tgfbr1)
transforming growth factor, beta receptor I 		ENSMUST00000007757 (Tgfbr1-001) 47353222-47414931 protein_coding
ENSMUST00000044234 (Tgfbr1-003) 47353307-47412133 protein_coding
ENSMUST00000107725 (Tgfbr1-002) 47386216-47411035 protein_coding
ENSMUST00000123962 (Tgfbr1-005) 47353598-47361313 processed_transcript
ENSMUST00000126171 (Tgfbr1-004) 47353610-47410807 protein_coding
ENSMUSG00000028339 (Col15a1)
collagen, type XV, alpha 1 		ENSMUST00000082303 (Col15a1-002) 47208161-47313163 protein_coding
ENSMUST00000102917 (Col15a1-001) 47208161-47313167 protein_coding
ENSMUST00000107730 (Col15a1-008) 47303722-47313162 protein_coding
ENSMUST00000107731 (Col15a1-009) 47288069-47313167 protein_coding
ENSMUST00000124105 (Col15a1-003) 47233267-47245512 processed_transcript
ENSMUST00000140094 (Col15a1-005) 47258856-47262488 processed_transcript
ENSMUST00000140413 (Col15a1-006) 47288057-47293222 protein_coding
ENSMUST00000146967 (Col15a1-007) 47288287-47299258 protein_coding
ENSMUST00000148103 (Col15a1-004) 47258535-47262299 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007BK_0001ENSDARG00000017494ENSDART00000121885ENSDARG00000061848ENSDART00000088643ENSDART00000111483ENSDART00000137065CIL_0007BK_0002ENSG00000106799ENST00000374990ENST00000374994ENST00000546584ENST00000547314ENST00000548365ENST00000549021ENST00000549766ENST00000550253ENST00000552516ENST00000552573ENSG00000204291ENST00000375001ENST00000467052ENST00000471477ENST00000496686ENST00000610452ENSG00000252942ENST00000517133ENSG00000264740ENST00000583374CIL_0007BK_0003ENSMUSG00000007613ENSMUST00000007757ENSMUST00000044234ENSMUST00000107725ENSMUST00000123962ENSMUST00000126171ENSMUSG00000028339ENSMUST00000082303ENSMUST00000102917ENSMUST00000107730ENSMUST00000107731ENSMUST00000124105ENSMUST00000140094ENSMUST00000140413ENSMUST00000146967ENSMUST00000148103
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007BK_0001ENSDARG00000017494ENSDART00000121885ENSDARG00000061848ENSDART00000088643ENSDART00000137065CIL_0007BK_0002ENSG00000106799ENST00000374990ENST00000374994ENST00000549021ENST00000550253ENST00000552516ENSG00000204291ENST00000375001ENST00000610452ENSG00000252942ENST00000517133ENSG00000264740ENST00000583374CIL_0007BK_0003ENSMUSG00000007613ENSMUST00000007757ENSMUST00000107725ENSMUST00000126171ENSMUSG00000028339ENSMUST00000082303ENSMUST00000102917ENSMUST00000107730ENSMUST00000107731
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017494 ENSDART00000121885 N/A N/A N/A 1.213±0.07 N/A N/A 0.684±0.27 1.013±0.00 1.774±0.00 N/A 1.331±0.00 N/A N/A N/A
ENSDARG00000061848 ENSDART00000088643 N/A N/A N/A N/A N/A N/A 0.204±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000111483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137065 N/A N/A N/A 0.732±0.48 N/A N/A 2.098±1.57 0.645±0.59 N/A N/A 3.650±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106799 ENST00000374990 3.325±0.00 1.455±0.00 N/A 3.192±0.00 2.625±0.00 0.778±0.00 0.967±0.00 2.642±0.00 0.784±0.00 1.300±0.00 0.683±0.00 1.168±0.00 0.826±0.00 1.904±0.00
ENST00000374994 N/A 0.805±0.00 N/A 2.004±0.00 0.894±0.00 1.446±0.00 0.970±0.00 0.852±0.04 2.199±0.00 1.181±0.18 0.765±0.48 2.809±1.78 2.905±0.72 0.901±0.00
ENST00000546584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.581±0.00
ENST00000549766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550253 N/A N/A N/A N/A 5.413±0.00 N/A N/A N/A N/A N/A N/A 4.057±0.00 N/A 6.219±0.00
ENST00000552516 1.077±0.00 0.695±0.00 1.734±0.00 1.467±0.16 2.726±1.70 2.022±0.00 1.239±0.28 1.275±0.00 3.123±2.01 6.001±1.52 1.709±0.00 2.161±1.18 7.621±7.24 4.952±0.53
ENST00000552573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204291 ENST00000375001 13.848±0.00 16.049±0.00 N/A 0.549±0.00 32.179±23.11 5.938±0.39 14.342±3.98 5.235±5.08 3.906±3.82 4.537±3.89 4.760±2.80 12.837±9.53 94.117±44.28 55.309±0.00
ENST00000467052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610452 13.802±0.00 12.021±0.00 1.263±0.00 0.212±0.00 11.511±0.00 9.332±0.00 N/A 0.154±0.00 1.656±0.00 N/A 2.480±0.00 1.418±0.07 N/A 9.089±1.94
ENSG00000252942 ENST00000517133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.177±0.00 N/A N/A
ENSG00000264740 ENST00000583374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.239±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007613 ENSMUST00000007757 4.061±2.00 4.609±1.40 8.156±2.67 7.897±5.47 2.788±1.02 2.756±0.71 0.976±0.38 3.666±0.63 2.099±1.07 4.610±1.52 2.321±0.64 9.465±3.73 4.849±3.78 2.266±1.13
ENSMUST00000044234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107725 N/A N/A N/A 1.717±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.851±3.13
ENSMUST00000123962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126171 N/A N/A N/A N/A N/A 1.606±0.00 N/A N/A N/A N/A N/A N/A N/A 6.069±0.00
ENSMUSG00000028339 ENSMUST00000082303 N/A 11.422±2.01 N/A N/A 16.766±10.02 3.281±0.00 N/A N/A N/A 1.792±0.00 N/A 14.235±3.84 N/A 0.425±0.00
ENSMUST00000102917 101.182±30.67 6.706±1.66 27.524±1.15 1.640±0.20 36.638±11.98 15.057±1.79 18.236±1.20 8.954±1.34 0.170±0.07 6.189±1.76 3.783±1.31 35.541±9.58 4.918±4.80 1.225±0.22
ENSMUST00000107730 84.092±22.06 N/A 25.860±0.00 1.839±0.16 36.824±11.42 8.770±0.18 17.304±1.97 10.793±0.71 0.787±0.54 2.890±0.00 2.150±0.53 10.684±0.88 1.360±0.36 5.597±0.91
ENSMUST00000107731 N/A N/A N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A 1.571±0.35
ENSMUST00000124105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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