C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: si:dkey-173l11.5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000068137 si:dkey-173l11.5 7955 - 7:56093081-56108484 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000098342 si:dkey-173l11.5-201 56093081-56103550 protein_coding
  ENSDART00000149444 si:dkey-173l11.5-001 56093081-56108484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000098342ENSDART00000149444
Transcript ID Brain Heart Kidney Muscle
ENSDART00000098342 0.054±0.02 0.031±0.00 0.103±0.00 0.104±0.00
ENSDART00000149444 0.072±0.00 0.148±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Y9 CIL_0004Y9_0001 CGP 7:56093081-56124399

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007156 IEA homophilic cell adhesion
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000039068 CDH1 cadherin 1, type 1, E-cadherin (epithelial) protein_coding Homo_sapiens
ENSG00000062038 CDH3 cadherin 3, type 1, P-cadherin (placental) protein_coding Homo_sapiens
ENSMUSG00000000303 Cdh1 cadherin 1 protein_coding Mus_musculus
ENSMUSG00000061048 Cdh3 cadherin 3 protein_coding Mus_musculus

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