C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vesicle-associated membrane protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000068262 vamp5 7955 + 5:29941799-29952019 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000098635 vamp5-002 29941817-29951733 protein_coding
  ENSDART00000132070 vamp5-003 29941799-29949524 retained_intron
  ENSDART00000139862 vamp5-001 29941803-29952019 protein_coding
  ENSDART00000155423 vamp5-201 29948790-29951048 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000098635ENSDART00000139862
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000098635 6.246±1.01 7.489±1.55 9.115±2.26 0.743±0.00 2.861±0.00
ENSDART00000139862 17.258±2.69 46.922±32.38 36.630±16.85 0.867±0.00 4.287±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ID CIL_0004ID_0001 CGP 5:29915961-29952019

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000168899 VAMP5 vesicle-associated membrane protein 5 protein_coding Homo_sapiens
ENSMUSG00000073002 Vamp5 vesicle-associated membrane protein 5 protein_coding Mus_musculus

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