C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004ID_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000024116-ENSDARG00000068262 CGP 7955 5:29915961-29952019
GeneTranscriptPositionBiotype
ENSDARG00000024116 (vamp8)
vesicle-associated membrane protein 8 (endobrevin)
ENSDART00000031727 (vamp8-001) 29915961-29923913 protein_coding
ENSDARG00000068262 (vamp5)
vesicle-associated membrane protein 5
ENSDART00000098635 (vamp5-002) 29941817-29951733 protein_coding
ENSDART00000132070 (vamp5-003) 29941799-29949524 retained_intron
ENSDART00000139862 (vamp5-001) 29941803-29952019 protein_coding
ENSDART00000155423 (vamp5-201) 29948790-29951048 protein_coding
ENSDARG00000080292 (BX323557.1)
ENSDART00000119032 (BX323557.1-201) 29949915-29950004 miRNA
ENSDARG00000097931 (si:dkeyp-86b9.5)
si:dkeyp-86b9.5
ENSDART00000156605 (si:dkeyp-86b9.5-001) 29926998-29930762 lincRNA
CIL_0004ID_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000118640-ENSG00000168899 CGP 9606 2:85561562-85593412
GeneTranscriptPositionBiotype
ENSG00000118640 (VAMP8)
vesicle-associated membrane protein 8
ENST00000263864 (VAMP8-001) 85577491-85582031 protein_coding
ENST00000409760 (VAMP8-003) 85577593-85582031 protein_coding
ENST00000432071 (VAMP8-002) 85561562-85581997 protein_coding
ENSG00000168899 (VAMP5)
vesicle-associated membrane protein 5
ENST00000306384 (VAMP5-001) 85584408-85593412 protein_coding
ENST00000462451 (VAMP5-002) 85591597-85593243 retained_intron
ENSG00000276281 (Metazoa_SRP)
Metazoan signal recognition particle RNA
ENST00000616400 (Metazoa_SRP.1-363) 85567662-85567960 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ID_0001ENSDARG00000024116ENSDART00000031727ENSDARG00000068262ENSDART00000098635ENSDART00000132070ENSDART00000139862ENSDART00000155423ENSDARG00000080292ENSDART00000119032ENSDARG00000097931ENSDART00000156605CIL_0004ID_0002ENSG00000118640ENST00000263864ENST00000409760ENST00000432071ENSG00000168899ENST00000306384ENST00000462451ENSG00000276281ENST00000616400
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ID_0001ENSDARG00000024116ENSDART00000031727ENSDARG00000068262ENSDART00000098635ENSDART00000139862ENSDARG00000080292ENSDART00000119032ENSDARG00000097931ENSDART00000156605CIL_0004ID_0002ENSG00000118640ENST00000263864ENST00000409760ENST00000432071ENSG00000168899ENST00000306384ENST00000462451ENSG00000276281ENST00000616400
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000024116 ENSDART00000031727 N/A N/A N/A 5.511±1.56 N/A N/A 10.904±6.29 68.201±28.17 0.271±0.00 N/A 2.741±0.00 N/A N/A N/A
ENSDARG00000068262 ENSDART00000098635 N/A N/A N/A 6.246±1.01 N/A N/A 7.489±1.55 9.115±2.26 0.743±0.00 N/A 2.861±0.00 N/A N/A N/A
ENSDART00000132070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139862 N/A N/A N/A 17.258±2.69 N/A N/A 46.922±32.38 36.630±16.85 0.867±0.00 N/A 4.287±0.00 N/A N/A N/A
ENSDART00000155423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000080292 ENSDART00000119032 N/A N/A N/A 284.817±0.00 N/A N/A 35.567±0.00 N/A 9.559±0.00 N/A 36.829±0.00 N/A N/A N/A
ENSDARG00000097931 ENSDART00000156605 N/A N/A N/A 0.765±0.46 N/A N/A 1.177±0.97 0.333±0.15 0.293±0.00 N/A 1.268±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118640 ENST00000263864 10.792±0.00 38.875±0.00 9.592±0.00 1.275±0.83 14.022±10.59 14.916±2.24 3.323±3.07 51.864±41.34 30.714±26.71 77.974±64.08 1.456±0.00 34.510±34.33 173.692±48.25 13.344±0.00
ENST00000409760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.505±0.00 N/A N/A
ENST00000432071 22.442±0.00 61.575±0.00 1.391±0.00 4.332±3.68 12.227±7.90 16.820±0.00 5.906±0.00 93.753±0.00 33.422±0.00 51.835±0.00 2.808±0.65 18.787±2.79 177.655±8.67 17.925±1.12
ENSG00000168899 ENST00000306384 80.517±0.00 104.572±0.00 0.332±0.00 9.072±8.59 58.473±0.00 36.279±35.69 25.871±0.00 23.340±23.00 18.637±18.55 66.186±65.49 14.517±10.09 37.514±22.18 67.637±25.47 26.711±17.54
ENST00000462451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.082±0.00
ENSG00000276281 ENST00000616400 N/A 0.455±0.00 N/A 0.072±0.00 0.136±0.00 0.186±0.00 N/A N/A N/A N/A N/A 1.457±0.00 N/A 0.174±0.00

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