C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vacuolar protein sorting 4b (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000069175 vps4b 7955 - 2:13047975-13060553 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000079757 vps4b-001 13047975-13060553 protein_coding
  ENSDART00000127693 vps4b-002 13047975-13060545 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000079757ENSDART00000127693
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000079757 5.115±2.36 18.998±1.40 25.940±1.75 0.615±0.00 1.115±0.00
ENSDART00000127693 13.581±2.51 20.208±0.23 20.170±0.00 1.886±0.00 6.833±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000B7 CIL_0000B7_0001 CGP 2:13015744-13060553

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0009378 IEA four-way junction helicase activity
GO:0016887 IEA ATPase activity
GO:0017111 IEA nucleoside-triphosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000119541 VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae) protein_coding Homo_sapiens
ENSMUSG00000009907 Vps4b vacuolar protein sorting 4b (yeast) protein_coding Mus_musculus

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