C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: opsin 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000070110 opn5 7955 + 20:36022681-36061304 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000021456 opn5-201 36034685-36059172 protein_coding
  ENSDART00000140457 opn5-001 36022681-36061304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000021456ENSDART00000140457
Transcript ID Brain Heart Kidney Muscle
ENSDART00000021456 N/A N/A N/A 0.070±0.00
ENSDART00000140457 0.281±0.04 0.203±0.00 0.215±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007R CIL_00007R_0001 CGP 20:36022681-36132030

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0007165 IEA signal transduction
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007601 IEA visual perception
GO:0009881 IEA photoreceptor activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0018298 IEA protein-chromophore linkage
GO:0050896 IEA response to stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000124818 OPN5 opsin 5 protein_coding Homo_sapiens
ENSMUSG00000043972 Opn5 opsin 5 protein_coding Mus_musculus

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