C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: opsin 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124818 OPN5 9606 + 6:47781982-47832780 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000244799 OPN5-001 47787068-47826381 processed_transcript
  ENST00000371211 OPN5-003 47782039-47824699 protein_coding
  ENST00000393699 OPN5-005 47782067-47811817 protein_coding
  ENST00000489301 OPN5-002 47781982-47832780 protein_coding
  ENST00000510695 OPN5-006 47794749-47795562 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartPlacentaTestisENST00000244799ENST00000371211ENST00000489301
Transcript ID Brain Breast Heart Placenta Testis
ENST00000244799 0.006±0.00 0.006±0.00 0.103±0.00 N/A 2.347±1.65
ENST00000371211 N/A N/A N/A N/A 1.168±0.00
ENST00000489301 0.006±0.00 N/A N/A 0.021±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007R CIL_00007R_0002 CGP 6:47781982-48068689

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005502 IEA 11-cis retinal binding
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007601 IEA visual perception
GO:0007602 IEA phototransduction
GO:0009881 IEA photoreceptor activity
GO:0016021 IEA integral component of membrane
GO:0018298 IEA protein-chromophore linkage

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070110 opn5 opsin 5 protein_coding Danio_rerio
ENSMUSG00000043972 Opn5 opsin 5 protein_coding Mus_musculus

Loading