C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: opsin 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043972 Opn5 10090 - 17:42556783-42611313 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068355 Opn5-201 42556783-42611313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyMuscleTestisENSMUST00000068355
Transcript ID Bladder Brain Colon Kidney Muscle Testis
ENSMUST00000068355 0.011±0.01 0.089±0.00 0.044±0.00 0.023±0.00 0.022±0.00 0.023±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004930 IDA G-protein coupled receptor activity
GO:0005502 IDA 11-cis retinal binding
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007601 IEA visual perception
GO:0007602 IEA phototransduction
GO:0009881 IEA photoreceptor activity
GO:0016021 IEA integral component of membrane
GO:0018298 IEA protein-chromophore linkage

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070110 opn5 opsin 5 protein_coding Danio_rerio
ENSG00000124818 OPN5 opsin 5 protein_coding Homo_sapiens

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