C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00007R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070110-ENSDARG00000008249 CGP 7955 20:36022681-36132030
GeneTranscriptPositionBiotype
ENSDARG00000008249 (ptchd4)
patched domain containing 4
ENSDART00000146055 (ptchd4-001) 36091016-36132030 protein_coding
ENSDARG00000070110 (opn5)
opsin 5
ENSDART00000021456 (opn5-201) 36034685-36059172 protein_coding
ENSDART00000140457 (opn5-001) 36022681-36061304 protein_coding
CIL_00007R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124818-ENSG00000244694 CGP 9606 6:47781982-48068689
GeneTranscriptPositionBiotype
ENSG00000124818 (OPN5)
opsin 5
ENST00000244799 (OPN5-001) 47787068-47826381 processed_transcript
ENST00000371211 (OPN5-003) 47782039-47824699 protein_coding
ENST00000393699 (OPN5-005) 47782067-47811817 protein_coding
ENST00000489301 (OPN5-002) 47781982-47832780 protein_coding
ENST00000510695 (OPN5-006) 47794749-47795562 processed_transcript
ENSG00000200340 (RNU1-105P)
RNA, U1 small nuclear 105, pseudogene
ENST00000363470 (RNU1-105P-201) 47823390-47823550 snRNA
ENSG00000244694 (PTCHD4)
patched domain containing 4
ENST00000339488 (PTCHD4-002) 47878028-48068689 protein_coding
ENST00000398738 (PTCHD4-001) 47899609-48068653 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007R_0001ENSDARG00000008249ENSDART00000146055ENSDARG00000070110ENSDART00000021456ENSDART00000140457CIL_00007R_0002ENSG00000124818ENST00000244799ENST00000371211ENST00000393699ENST00000489301ENST00000510695ENSG00000200340ENST00000363470ENSG00000244694ENST00000339488ENST00000398738
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007R_0001ENSDARG00000008249ENSDART00000146055ENSDARG00000070110ENSDART00000021456ENSDART00000140457CIL_00007R_0002ENSG00000124818ENST00000244799ENST00000371211ENST00000489301ENSG00000200340ENST00000363470ENSG00000244694ENST00000339488ENST00000398738
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008249 ENSDART00000146055 N/A N/A N/A 0.895±0.00 N/A N/A 0.026±0.00 0.061±0.01 N/A N/A 0.060±0.00 N/A N/A N/A
ENSDARG00000070110 ENSDART00000021456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A
ENSDART00000140457 N/A N/A N/A 0.281±0.04 N/A N/A 0.203±0.00 0.215±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124818 ENST00000244799 N/A N/A N/A 0.006±0.00 0.006±0.00 N/A 0.103±0.00 N/A N/A N/A N/A N/A N/A 2.347±1.65
ENST00000371211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.168±0.00
ENST00000393699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489301 N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A
ENST00000510695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200340 ENST00000363470 N/A N/A N/A 0.514±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.797±0.00
ENSG00000244694 ENST00000339488 0.122±0.00 0.126±0.00 0.476±0.00 0.421±0.29 0.199±0.03 0.191±0.14 0.294±0.24 0.066±0.01 0.150±0.14 0.314±0.29 0.061±0.03 0.142±0.15 0.199±0.18 0.061±0.01
ENST00000398738 0.010±0.00 0.073±0.00 N/A 0.209±0.00 0.133±0.08 0.069±0.04 0.090±0.08 0.110±0.04 N/A 0.082±0.00 N/A 0.042±0.03 0.093±0.01 0.071±0.04

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