C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeo box C5a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000070340 hoxc5a 7955 + 23:36170218-36172055 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000103134 hoxc5a-201 36170218-36171834 protein_coding
  ENSDART00000139319 hoxc5a-001 36170282-36172055 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleENSDART00000103134ENSDART00000139319
Transcript ID Brain Kidney Muscle
ENSDART00000103134 0.721±0.43 0.886±0.00 N/A
ENSDART00000139319 0.698±0.46 0.938±0.47 0.755±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000172789 HOXC5 homeobox C5 protein_coding Homo_sapiens
ENSG00000273049 RP11-834C11.12 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000476742} protein_coding Homo_sapiens
ENSMUSG00000022485 Hoxc5 homeobox C5 protein_coding Mus_musculus

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