C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: homeo box C5a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000139319 hoxc5a-001 ENSDARG00000070340 7955 + 23:36170282-36172055 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleENSDART00000139319
Transcript ID Brain Kidney Muscle
ENSDART00000139319 0.698±0.46 0.938±0.47 0.755±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049272 Hoxb5-001 protein_coding Mus_musculus 3e-25 121
ENSMUST00000190470 Hoxb5-002 retained_intron Mus_musculus 6e-24 117

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