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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | homeobox C5 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000172789  |
HOXC5 | 9606 | + |
12:54032853-54035358  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000312492 |
HOXC5-001 | 54032853-54035358 | protein_coding | ||
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007SU | CIL_0007SU_0001 | VISTA | 12:53718454-54321661 |
| CIL_00084M | CIL_00084M_0001 | VISTA | 12:53732854-54334005 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IDA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006357 | TAS | regulation of transcription from RNA polymerase II promoter |
| GO:0009952 | IEA | anterior/posterior pattern specification |
| GO:0030054 | IDA | cell junction |
| GO:0043565 | IEA | sequence-specific DNA binding |
| GO:0048706 | IEA | embryonic skeletal system development |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000070340
|
hoxc5a | homeo box C5a | protein_coding | Danio_rerio | |
|
ENSMUSG00000022485
|
Hoxc5 | homeobox C5 | protein_coding | Mus_musculus | |
