C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small nuclear RNA activating complex, polypeptide 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000071237 snapc3 7955 - 1:27049293-27149849 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000105184 snapc3-201 27049664-27071824 protein_coding
  ENSDART00000124781 snapc3-202 27049293-27149818 protein_coding
  ENSDART00000130180 snapc3-203 27127995-27149823 protein_coding
  ENSDART00000149208 snapc3-002 27148347-27149745 processed_transcript
  ENSDART00000150284 snapc3-001 27049638-27149849 protein_coding
  ENSDART00000150872 snapc3-003 27140530-27149756 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000124781ENSDART00000130180ENSDART00000150284ENSDART00000150872
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000124781 1.439±0.86 0.578±0.30 1.895±1.21 0.204±0.00 0.202±0.00
ENSDART00000130180 0.946±0.66 2.502±3.20 6.333±4.56 N/A 0.115±0.00
ENSDART00000150284 N/A 0.293±0.00 N/A N/A N/A
ENSDART00000150872 N/A N/A N/A 0.168±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UX CIL_0005UX_0001 CGP 1:27049293-27255466

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000164975 SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa protein_coding Homo_sapiens
ENSMUSG00000028483 Snapc3 small nuclear RNA activating complex, polypeptide 3 protein_coding Mus_musculus

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