C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PDZ domain containing RING finger 3a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000073757 pdzrn3a 7955 - 23:10934944-11020503 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000112965 pdzrn3a-201 10934944-11020503 protein_coding
  ENSDART00000142533 pdzrn3a-001 10937786-10938223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000112965ENSDART00000142533
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000112965 1.539±1.35 0.029±0.00 0.065±0.00 N/A 0.216±0.00
ENSDART00000142533 N/A N/A N/A 0.256±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JR CIL_0005JR_0001 CGP 23:10911416-11020503

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000121440 PDZRN3 PDZ domain containing ring finger 3 protein_coding Homo_sapiens
ENSMUSG00000035357 Pdzrn3 PDZ domain containing RING finger 3 protein_coding Mus_musculus

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