C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sarcoglycan, alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000074156 sgca 7955 + 12:3669968-3684771 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000110958 sgca-201 3673349-3684094 protein_coding
  ENSDART00000148835 sgca-002 3669968-3684474 protein_coding
  ENSDART00000149427 sgca-001 3669970-3684771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000110958ENSDART00000148835ENSDART00000149427
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000110958 N/A N/A N/A 0.084±0.00 N/A
ENSDART00000148835 N/A 103.192±10.22 1.912±0.00 N/A N/A
ENSDART00000149427 0.710±0.17 15.322±8.75 1.087±0.26 N/A 7.655±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X4 CIL_0004X4_0001 CGP 12:3669968-3725230

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0008150 ND biological_process
GO:0016012 IEA sarcoglycan complex
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000108823 SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) protein_coding Homo_sapiens
ENSMUSG00000001508 Sgca sarcoglycan, alpha (dystrophin-associated glycoprotein) protein_coding Mus_musculus

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