C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BRCA1 interacting protein C-terminal helicase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000074410 brip1 7955 - 15:26801204-26871694 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000109262 brip1-201 26801204-26871645 protein_coding
  ENSDART00000112643 brip1-001 26801206-26871275 protein_coding
  ENSDART00000149374 brip1-003 26863368-26871694 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000109262ENSDART00000112643
Transcript ID Brain Heart Kidney
ENSDART00000109262 0.690±0.00 N/A 3.219±0.00
ENSDART00000112643 0.517±0.00 0.663±0.17 4.790±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JV CIL_0007JV_0004 UCNEbase 15:26449307-26854804
CIL_0000LR CIL_0000LR_0001 CGP 15:26736443-26871694

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004003 IEA ATP-dependent DNA helicase activity
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006139 IEA nucleobase-containing compound metabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0016787 IEA hydrolase activity
GO:0016817 IEA hydrolase activity, acting on acid anhydrides
GO:0016818 IEA hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000136492 BRIP1 BRCA1 interacting protein C-terminal helicase 1 protein_coding Homo_sapiens
ENSMUSG00000034329 Brip1 BRCA1 interacting protein C-terminal helicase 1 protein_coding Mus_musculus

Loading