C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000LR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030058-ENSDARG00000074410 CGP 7955 15:26736443-26871694
GeneTranscriptPositionBiotype
ENSDARG00000030058 (tbx4)
T-box 4 		ENSDART00000018603 (tbx4-001) 26736443-26760093 protein_coding
ENSDARG00000074410 (brip1)
BRCA1 interacting protein C-terminal helicase 1 		ENSDART00000109262 (brip1-201) 26801204-26871645 protein_coding
ENSDART00000112643 (brip1-001) 26801206-26871275 protein_coding
ENSDART00000149374 (brip1-003) 26863368-26871694 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000LR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000094-ENSMUSG00000034329 CGP 10090 11:85886422-86201193
GeneTranscriptPositionBiotype
ENSMUSG00000000094 (Tbx4)
T-box 4 		ENSMUST00000000096 (Tbx4-201) 85890063-85916097 protein_coding
ENSMUST00000108045 (Tbx4-002) 85896765-85916095 protein_coding
ENSMUST00000108047 (Tbx4-001) 85886422-85916095 protein_coding
ENSMUSG00000034329 (Brip1)
BRCA1 interacting protein C-terminal helicase 1 		ENSMUST00000044423 (Brip1-001) 86058138-86201193 protein_coding
ENSMUST00000123366 (Brip1-003) 86195699-86201166 processed_transcript
ENSMUST00000149748 (Brip1-002) 86195033-86201164 processed_transcript
ENSMUSG00000080823 (Atp5l-ps2)
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, pseudogene 2 		ENSMUST00000121382 (Atp5l-ps2-001) 86185329-86185642 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LR_0001ENSDARG00000030058ENSDART00000018603ENSDARG00000074410ENSDART00000109262ENSDART00000112643ENSDART00000149374CIL_0000LR_0002ENSMUSG00000000094ENSMUST00000000096ENSMUST00000108045ENSMUST00000108047ENSMUSG00000034329ENSMUST00000044423ENSMUST00000123366ENSMUST00000149748ENSMUSG00000080823ENSMUST00000121382
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LR_0001ENSDARG00000030058ENSDART00000018603ENSDARG00000074410ENSDART00000109262ENSDART00000112643CIL_0000LR_0002ENSMUSG00000000094ENSMUST00000000096ENSMUST00000108045ENSMUST00000108047ENSMUSG00000034329ENSMUST00000044423ENSMUST00000123366ENSMUST00000149748ENSMUSG00000080823ENSMUST00000121382
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030058 ENSDART00000018603 N/A N/A N/A 0.066±0.02 N/A N/A 0.096±0.02 0.241±0.07 N/A N/A N/A N/A N/A N/A
ENSDARG00000074410 ENSDART00000109262 N/A N/A N/A 0.690±0.00 N/A N/A N/A 3.219±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000112643 N/A N/A N/A 0.517±0.00 N/A N/A 0.663±0.17 4.790±1.19 N/A N/A N/A N/A N/A N/A
ENSDART00000149374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000094 ENSMUST00000000096 0.017±0.00 N/A 5.640±1.09 N/A 0.303±0.00 N/A 0.090±0.08 0.008±0.00 0.054±0.00 9.154±0.00 0.395±0.00 N/A 0.802±0.39 0.035±0.03
ENSMUST00000108045 0.152±0.12 0.090±0.05 1.247±0.00 0.036±0.00 0.150±0.10 0.440±0.14 0.002±0.00 0.033±0.02 0.023±0.01 N/A 0.558±0.38 1.084±0.30 0.456±0.00 0.226±0.11
ENSMUST00000108047 N/A N/A 2.920±0.57 0.040±0.00 N/A N/A 0.152±0.00 N/A 0.018±0.00 33.977±3.66 0.524±0.00 N/A 1.381±0.77 N/A
ENSMUSG00000034329 ENSMUST00000044423 0.270±0.02 0.048±0.02 0.205±0.00 0.386±0.27 0.150±0.07 0.215±0.08 0.098±0.02 0.281±0.10 1.185±1.00 0.099±0.03 0.016±0.01 0.421±0.23 0.870±0.55 0.430±0.16
ENSMUST00000123366 N/A N/A N/A N/A 0.373±0.00 0.399±0.00 N/A N/A N/A N/A N/A 0.429±0.00 N/A N/A
ENSMUST00000149748 N/A N/A N/A N/A N/A 0.540±0.00 N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A
ENSMUSG00000080823 ENSMUST00000121382 0.616±0.38 N/A 0.433±0.08 0.338±0.13 0.619±0.00 N/A 0.901±0.34 0.215±0.01 0.357±0.18 N/A 0.572±0.51 0.469±0.14 0.509±0.30 N/A

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