Source ID |
Type |
Tax ID |
Position |
TBX2 |
UCNEbase |
7955 |
10:28712083-28712350 |
Gene | Transcript | Position | Biotype |
Notice (8): Undefined index: CIL_0007JV_0003 [APP/View/Region/show.ctp, line 46]Code Context
<tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
<?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
'region_arr' => array(
'CIL_0007JV_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0002' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0004' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0005' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
),
'gene_desc_arr' => array(
'ENSG00000108506' => 'integrator complex subunit 2',
'ENSG00000108510' => 'mediator complex subunit 13',
'ENSG00000121068' => 'T-box 2',
'ENSG00000121075' => 'T-box 4',
'ENSG00000136492' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSG00000141376' => 'breast carcinoma amplified sequence 3',
'ENSG00000187013' => 'chromosome 17 open reading frame 82',
'ENSG00000202361' => 'Y RNA',
'ENSG00000253506' => 'nascent polypeptide-associated complex alpha subunit 2',
'ENSG00000266934' => null,
'ENSG00000267131' => null,
'ENSG00000267137' => null,
'ENSG00000267280' => 'TBX2 antisense RNA 1',
'ENSG00000267667' => null,
'ENSG00000273982' => null,
'ENSG00000278751' => null,
'ENSMUSG00000000093' => 'T-box 2',
'ENSMUSG00000000094' => 'T-box 4',
'ENSMUSG00000018068' => 'integrator complex subunit 2',
'ENSMUSG00000034297' => 'mediator complex subunit 13',
'ENSMUSG00000034329' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSMUSG00000059439' => 'breast carcinoma amplified sequence 3',
'ENSMUSG00000069785' => 'predicted gene 11444',
'ENSMUSG00000080823' => 'ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, pseudogene 2',
'ENSMUSG00000081632' => 'predicted gene 11443',
'ENSMUSG00000085208' => 'BRCA1 interacting protein C-terminal helicase 1, opposite strand',
'ENSMUSG00000085514' => 'breast carcinoma amplified sequence 3 opposite strand 2',
'ENSMUSG00000086199' => 'breast carcinoma amplified sequence 3, opposite strand 1',
'ENSMUSG00000087013' => 'RIKEN cDNA 2610027K06 gene',
'ENSMUSG00000089508' => 'predicted gene, 23473',
'ENSMUSG00000093278' => 'microRNA 5110',
'ENSDARG00000006120' => 'T-box 2b',
'ENSDARG00000030058' => 'T-box 4',
'ENSDARG00000074410' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSDARG00000084002' => '5S ribosomal RNA',
'ENSDARG00000086181' => 'Uncharacterized protein',
'ENSDARG00000090764' => 'breast carcinoma amplified sequence 3',
'ENSDARG00000096918' => 'si:ch211-229g11.3',
'ENSDARG00000097072' => 'si:ch211-229g11.6',
'ENSDARG00000097266' => 'si:ch211-229g11.5',
'ENSDARG00000018025' => 'T-box gene 2a',
'ENSDARG00000097120' => 'si:ch211-199d18.3'
),
'gene_name_arr' => array(
'ENSG00000108506' => 'INTS2',
'ENSG00000108510' => 'MED13',
'ENSG00000121068' => 'TBX2',
'ENSG00000121075' => 'TBX4',
'ENSG00000136492' => 'BRIP1',
'ENSG00000141376' => 'BCAS3',
'ENSG00000187013' => 'C17orf82',
'ENSG00000202361' => 'Y_RNA',
'ENSG00000253506' => 'NACA2',
'ENSG00000266934' => 'RP11-332H18.3',
'ENSG00000267131' => 'RP11-332H18.5',
'ENSG00000267137' => 'RP11-15K2.2',
'ENSG00000267280' => 'TBX2-AS1',
'ENSG00000267667' => 'RP11-136H19.1',
'ENSG00000273982' => 'RP11-332H18.7',
'ENSG00000278751' => 'AC005901.1',
'ENSMUSG00000000093' => 'Tbx2',
'ENSMUSG00000000094' => 'Tbx4',
'ENSMUSG00000018068' => 'Ints2',
'ENSMUSG00000034297' => 'Med13',
'ENSMUSG00000034329' => 'Brip1',
'ENSMUSG00000059439' => 'Bcas3',
'ENSMUSG00000069785' => 'Gm11444',
'ENSMUSG00000080823' => 'Atp5l-ps2',
'ENSMUSG00000081632' => 'Gm11443',
'ENSMUSG00000085208' => 'Brip1os',
'ENSMUSG00000085514' => 'Bcas3os2',
'ENSMUSG00000086199' => 'Bcas3os1',
'ENSMUSG00000087013' => '2610027K06Rik',
'ENSMUSG00000089508' => 'Gm23473',
'ENSMUSG00000093278' => 'Mir5110',
'ENSDARG00000006120' => 'tbx2b',
'ENSDARG00000030058' => 'tbx4',
'ENSDARG00000074410' => 'brip1',
'ENSDARG00000084002' => '5S_rRNA',
'ENSDARG00000086181' => 'BX005052.1',
'ENSDARG00000090764' => 'bcas3',
'ENSDARG00000096918' => 'si:ch211-229g11.3',
'ENSDARG00000097072' => 'si:ch211-229g11.6',
'ENSDARG00000097266' => 'si:ch211-229g11.5',
'ENSDARG00000018025' => 'tbx2a',
'ENSDARG00000097120' => 'si:ch211-199d18.3'
),
'accession_table' => array(
(int) 0 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 1 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 2 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 3 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 4 => array(
'region_elements' => array(
[maximum depth reached]
)
)
),
'all_tissues' => array(
(int) 0 => 'Adipose',
(int) 31 => 'Adrenal',
(int) 64 => 'Bladder',
(int) 89 => 'Brain',
(int) 143 => 'Breast',
(int) 175 => 'Colon',
(int) 207 => 'Heart',
(int) 256 => 'Kidney',
(int) 303 => 'Liver',
(int) 342 => 'Lung',
(int) 378 => 'Muscle',
(int) 419 => 'Ovary',
(int) 464 => 'Placenta',
(int) 501 => 'Testis'
),
'column_titles' => array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
),
'geneviewer' => array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCh38.2bit',
'bwgURI' => '/static/files/GRCh38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 10090 => array(
'version' => 'GRCm38',
'coord_key' => 'Mus musculus',
'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCm38.2bit',
'bwgURI' => '/static/files/GRCm38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 7955 => array(
'version' => 'Zv9',
'coord_key' => 'Danio rerio',
'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
'twoBitURI' => '/static/files/Zv9.2bit',
'bwgURI' => '/static/files/Zv9.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
)
),
'transcript_count' => (int) 160,
'longest_tissue_len' => (int) 8,
'transcript_data' => array(
'ENST00000251334' => array(
'start' => '61867249',
'end' => '61927991',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-002'
),
'ENST00000444766' => array(
'start' => '61865370',
'end' => '61928016',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-001'
),
'ENST00000578805' => array(
'start' => '61891577',
'end' => '61894186',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-004'
),
'ENST00000583076' => array(
'start' => '61926408',
'end' => '61927426',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-003'
),
'ENST00000583822' => array(
'start' => '61872023',
'end' => '61885005',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-006'
),
'ENST00000584967' => array(
'start' => '61877981',
'end' => '61885290',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-005'
),
'ENST00000617492' => array(
'start' => '61865367',
'end' => '61927105',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-201'
),
'ENST00000397786' => array(
'start' => '61942605',
'end' => '62065282',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MED13-001'
),
'ENST00000578132' => array(
'start' => '62029298',
'end' => '62033825',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MED13-005'
),
'ENST00000580896' => array(
'start' => '62031513',
'end' => '62032473',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MED13-004'
),
'ENST00000581994' => array(
'start' => '62029277',
'end' => '62031489',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MED13-002'
),
'ENST00000582786' => array(
'start' => '61955311',
'end' => '61955763',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MED13-006'
),
'ENST00000583958' => array(
'start' => '62010427',
'end' => '62030000',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MED13-003'
),
'ENST00000240328' => array(
'start' => '61399896',
'end' => '61409425',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX2-001'
),
'ENST00000419047' => array(
'start' => '61399910',
'end' => '61409466',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'TBX2-002'
),
'ENST00000477081' => array(
'start' => '61400365',
'end' => '61409124',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TBX2-003'
),
'ENST00000586986' => array(
'start' => '61408722',
'end' => '61409466',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX2-005'
),
'ENST00000240335' => array(
'start' => '61456446',
'end' => '61484303',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX4-002'
),
'ENST00000393853' => array(
'start' => '61452418',
'end' => '61485110',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX4-001'
),
'ENST00000586874' => array(
'start' => '61478363',
'end' => '61481346',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX4-007'
),
'ENST00000589003' => array(
'start' => '61452404',
'end' => '61478740',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX4-003'
),
'ENST00000589449' => array(
'start' => '61478351',
'end' => '61483370',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX4-006'
),
'ENST00000590174' => array(
'start' => '61465793',
'end' => '61480275',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TBX4-008'
),
'ENST00000593249' => array(
'start' => '61464214',
'end' => '61478789',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX4-005'
),
'ENST00000259008' => array(
'start' => '61681266',
'end' => '61863521',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-001'
),
'ENST00000577598' => array(
'start' => '61684772',
'end' => '61861539',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-002'
),
'ENST00000577913' => array(
'start' => '61857228',
'end' => '61863344',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-003'
),
'ENST00000579028' => array(
'start' => '61776401',
'end' => '61793673',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'BRIP1-005'
),
'ENST00000583837' => array(
'start' => '61775878',
'end' => '61780277',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BRIP1-004'
),
'ENST00000584322' => array(
'start' => '61739057',
'end' => '61776480',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-006'
),
'ENST00000390652' => array(
'start' => '60677889',
'end' => '61392838',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-001'
),
'ENST00000407086' => array(
'start' => '60677872',
'end' => '61392831',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-002'
),
'ENST00000408905' => array(
'start' => '60679458',
'end' => '61392831',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-013'
),
'ENST00000585744' => array(
'start' => '60887050',
'end' => '61392125',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-005'
),
'ENST00000585812' => array(
'start' => '61157456',
'end' => '61392831',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-008'
),
'ENST00000585979' => array(
'start' => '61016962',
'end' => '61368342',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-028'
),
'ENST00000586041' => array(
'start' => '60889761',
'end' => '60980605',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-025'
),
'ENST00000586241' => array(
'start' => '60677892',
'end' => '60874738',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'BCAS3-018'
),
'ENST00000586484' => array(
'start' => '60887279',
'end' => '60989988',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-023'
),
'ENST00000586705' => array(
'start' => '60886383',
'end' => '60947253',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-022'
),
'ENST00000587002' => array(
'start' => '61078441',
'end' => '61368410',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-032'
),
'ENST00000587037' => array(
'start' => '61002557',
'end' => '61037903',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-027'
),
'ENST00000587294' => array(
'start' => '61159362',
'end' => '61392182',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-031'
),
'ENST00000587872' => array(
'start' => '61377830',
'end' => '61380572',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'BCAS3-011'
),
'ENST00000588008' => array(
'start' => '61084505',
'end' => '61087498',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-030'
),
'ENST00000588168' => array(
'start' => '60677453',
'end' => '60747282',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-014'
),
'ENST00000588462' => array(
'start' => '60679458',
'end' => '61392831',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-012'
),
'ENST00000588532' => array(
'start' => '60677879',
'end' => '60709266',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'BCAS3-017'
),
'ENST00000588569' => array(
'start' => '61245260',
'end' => '61392273',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-033'
),
'ENST00000588720' => array(
'start' => '61388276',
'end' => '61392831',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'BCAS3-010'
),
'ENST00000588874' => array(
'start' => '60887050',
'end' => '61392830',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-006'
),
'ENST00000589222' => array(
'start' => '60677852',
'end' => '61392831',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-004'
),
'ENST00000589916' => array(
'start' => '60677868',
'end' => '60808094',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'BCAS3-020'
),
'ENST00000590128' => array(
'start' => '60887239',
'end' => '60947352',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-024'
),
'ENST00000590352' => array(
'start' => '60986857',
'end' => '61015785',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-026'
),
'ENST00000591147' => array(
'start' => '60677848',
'end' => '60747279',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'BCAS3-015'
),
'ENST00000591371' => array(
'start' => '60677857',
'end' => '60747222',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-019'
),
'ENST00000592393' => array(
'start' => '60677892',
'end' => '60821775',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-021'
),
'ENST00000592702' => array(
'start' => '61245216',
'end' => '61392831',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-009'
),
'ENST00000592827' => array(
'start' => '61016964',
'end' => '61074988',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-029'
),
'ENST00000592848' => array(
'start' => '60677887',
'end' => '60889742',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'BCAS3-016'
),
'ENST00000593004' => array(
'start' => '60677866',
'end' => '60720356',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-034'
),
'ENST00000613443' => array(
'start' => '60677889',
'end' => '61084567',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-201'
),
'ENST00000614888' => array(
'start' => '60677889',
'end' => '61084567',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-202'
),
'ENST00000335108' => array(
'start' => '61411751',
'end' => '61413280',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'C17orf82-201'
),
'ENST00000623772' => array(
'start' => '61411751',
'end' => '61413280',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'C17orf82-001'
),
'ENST00000365491' => array(
'start' => '61874084',
'end' => '61874182',
'transcript_biotype' => 'misc_RNA',
'transcript_name' => 'Y_RNA.1-560'
),
'ENST00000521764' => array(
'start' => '61590426',
'end' => '61591202',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'NACA2-001'
),
'ENST00000585495' => array(
'start' => '61383401',
'end' => '61384680',
'transcript_biotype' => 'sense_intronic',
'transcript_name' => 'RP11-332H18.3-001'
),
'ENST00000589244' => array(
'start' => '61382785',
'end' => '61383555',
'transcript_biotype' => 'sense_intronic',
'transcript_name' => 'RP11-332H18.3-002'
),
'ENST00000585765' => array(
'start' => '61361668',
'end' => '61400243',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-332H18.5-001'
),
'ENST00000592766' => array(
'start' => '61460224',
'end' => '61463384',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-15K2.2-001'
),
'ENST00000586706' => array(
'start' => '61393458',
'end' => '61395447',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-005'
),
'ENST00000589814' => array(
'start' => '61393458',
'end' => '61399370',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-004'
),
'ENST00000590421' => array(
'start' => '61393457',
'end' => '61399606',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-002'
),
'ENST00000591313' => array(
'start' => '61393458',
'end' => '61399588',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-003'
),
'ENST00000592009' => array(
'start' => '61393458',
'end' => '61411555',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-001'
),
'ENST00000592377' => array(
'start' => '61393456',
'end' => '61394062',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-006'
),
'ENST00000585921' => array(
'start' => '61130704',
'end' => '61135964',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-136H19.1-001'
),
'ENST00000614751' => array(
'start' => '61354763',
'end' => '61355155',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-332H18.7-001'
),
'ENST00000616674' => array(
'start' => '61485684',
'end' => '61485801',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'AC005901.1-201'
),
'ENSMUST00000000095' => array(
'start' => '85832551',
'end' => '85841948',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Tbx2-001'
),
'ENSMUST00000000096' => array(
'start' => '85890063',
'end' => '85916097',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Tbx4-201'
),
'ENSMUST00000108045' => array(
'start' => '85896765',
'end' => '85916095',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Tbx4-002'
),
'ENSMUST00000108047' => array(
'start' => '85886422',
'end' => '85916095',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Tbx4-001'
),
'ENSMUST00000018212' => array(
'start' => '86210681',
'end' => '86257550',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ints2-001'
),
'ENSMUST00000108039' => array(
'start' => '86212088',
'end' => '86256546',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ints2-002'
),
'ENSMUST00000127745' => array(
'start' => '86235612',
'end' => '86238883',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ints2-009'
),
'ENSMUST00000130614' => array(
'start' => '86256353',
'end' => '86257340',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ints2-004'
),
'ENSMUST00000132024' => array(
'start' => '86255360',
'end' => '86257554',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ints2-005'
),
'ENSMUST00000134828' => array(
'start' => '86217809',
'end' => '86229233',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Ints2-011'
),
'ENSMUST00000134883' => array(
'start' => '86234672',
'end' => '86257541',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ints2-008'
),
'ENSMUST00000136469' => array(
'start' => '86256026',
'end' => '86257518',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ints2-003'
),
'ENSMUST00000139285' => array(
'start' => '86251051',
'end' => '86257575',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ints2-007'
),
'ENSMUST00000141756' => array(
'start' => '86256443',
'end' => '86257565',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Ints2-006'
),
'ENSMUST00000146421' => array(
'start' => '86224943',
'end' => '86232176',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ints2-010'
),
'ENSMUST00000043624' => array(
'start' => '86267033',
'end' => '86357602',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Med13-001'
),
'ENSMUST00000136622' => array(
'start' => '86272547',
'end' => '86278600',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Med13-002'
),
'ENSMUST00000140514' => array(
'start' => '86275374',
'end' => '86278992',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Med13-003'
),
'ENSMUST00000144983' => array(
'start' => '86331006',
'end' => '86332183',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Med13-004'
),
'ENSMUST00000044423' => array(
'start' => '86058138',
'end' => '86201193',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Brip1-001'
),
'ENSMUST00000123366' => array(
'start' => '86195699',
'end' => '86201166',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Brip1-003'
),
'ENSMUST00000149748' => array(
'start' => '86195033',
'end' => '86201164',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Brip1-002'
),
'ENSMUST00000074875' => array(
'start' => '85353212',
'end' => '85825350',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-201'
),
'ENSMUST00000092821' => array(
'start' => '85353212',
'end' => '85825350',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-202'
),
'ENSMUST00000092822' => array(
'start' => '85509638',
'end' => '85826058',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-006'
),
'ENSMUST00000108056' => array(
'start' => '85353167',
'end' => '85510991',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-003'
),
'ENSMUST00000108061' => array(
'start' => '85353167',
'end' => '85826058',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-001'
),
'ENSMUST00000108062' => array(
'start' => '85353167',
'end' => '85826058',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-002'
),
'ENSMUST00000130343' => array(
'start' => '85640704',
'end' => '85826055',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Bcas3-010'
),
'ENSMUST00000133194' => array(
'start' => '85581042',
'end' => '85603044',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Bcas3-011'
),
'ENSMUST00000138423' => array(
'start' => '85353185',
'end' => '85371163',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-014'
),
'ENSMUST00000140215' => array(
'start' => '85492568',
'end' => '85495914',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Bcas3-013'
),
'ENSMUST00000140562' => array(
'start' => '85821966',
'end' => '85825307',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Bcas3-009'
),
'ENSMUST00000142596' => array(
'start' => '85509627',
'end' => '85826058',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-005'
),
'ENSMUST00000144276' => array(
'start' => '85470752',
'end' => '85496993',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-012'
),
'ENSMUST00000145281' => array(
'start' => '85821413',
'end' => '85825646',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Bcas3-008'
),
'ENSMUST00000149662' => array(
'start' => '85801821',
'end' => '85825390',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-007'
),
'ENSMUST00000154396' => array(
'start' => '85466159',
'end' => '85826058',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-004'
),
'ENSMUST00000146433' => array(
'start' => '85846790',
'end' => '85850333',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Gm11444-001'
),
'ENSMUST00000121382' => array(
'start' => '86185329',
'end' => '86185642',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Atp5l-ps2-001'
),
'ENSMUST00000118790' => array(
'start' => '85950495',
'end' => '85950973',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm11443-001'
),
'ENSMUST00000128960' => array(
'start' => '86201370',
'end' => '86211192',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Brip1os-001'
),
'ENSMUST00000143819' => array(
'start' => '86201383',
'end' => '86304443',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Brip1os-002'
),
'ENSMUST00000134305' => array(
'start' => '85766831',
'end' => '85775680',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Bcas3os2-001'
),
'ENSMUST00000146806' => array(
'start' => '85704143',
'end' => '85719744',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Bcas3os1-001'
),
'ENSMUST00000151652' => array(
'start' => '85702200',
'end' => '85719744',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Bcas3os1-002'
),
'ENSMUST00000128213' => array(
'start' => '85795875',
'end' => '85804155',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => '2610027K06Rik-003'
),
'ENSMUST00000136117' => array(
'start' => '85795789',
'end' => '85832223',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => '2610027K06Rik-001'
),
'ENSMUST00000140673' => array(
'start' => '85791661',
'end' => '85832209',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => '2610027K06Rik-002'
),
'ENSMUST00000158883' => array(
'start' => '85778812',
'end' => '85778927',
'transcript_biotype' => 'rRNA',
'transcript_name' => 'Gm23473-201'
),
'ENSMUST00000175537' => array(
'start' => '85760616',
'end' => '85760702',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Mir5110-201'
),
'ENSDART00000005491' => array(
'start' => '26713725',
'end' => '26720073',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx2b-201'
),
'ENSDART00000122101' => array(
'start' => '26713282',
'end' => '26720228',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx2b-001'
),
'ENSDART00000018603' => array(
'start' => '26736443',
'end' => '26760093',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx4-001'
),
'ENSDART00000109262' => array(
'start' => '26801204',
'end' => '26871645',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'brip1-201'
),
'ENSDART00000112643' => array(
'start' => '26801206',
'end' => '26871275',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'brip1-001'
),
'ENSDART00000149374' => array(
'start' => '26863368',
'end' => '26871694',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'brip1-003'
),
'ENSDART00000119402' => array(
'start' => '26824146',
'end' => '26824262',
'transcript_biotype' => 'rRNA',
'transcript_name' => '5S_rRNA.463-201'
),
'ENSDART00000126452' => array(
'start' => '26516494',
'end' => '26522053',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BX005052.1-201'
),
'ENSDART00000077172' => array(
'start' => '26277623',
'end' => '26425706',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'bcas3-201'
),
'ENSDART00000079294' => array(
'start' => '26676983',
'end' => '26703644',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'bcas3-202'
),
'ENSDART00000149957' => array(
'start' => '26276820',
'end' => '26703647',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'bcas3-001'
),
'ENSDART00000157224' => array(
'start' => '26645564',
'end' => '26649721',
'transcript_biotype' => 'sense_intronic',
'transcript_name' => 'si:ch211-229g11.3-001'
),
'ENSDART00000155403' => array(
'start' => '26705713',
'end' => '26712956',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'si:ch211-229g11.6-001'
),
'ENSDART00000155933' => array(
'start' => '26706247',
'end' => '26713025',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'si:ch211-229g11.6-002'
),
'ENSDART00000153528' => array(
'start' => '26652718',
'end' => '26654988',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-004'
),
'ENSDART00000153757' => array(
'start' => '26652167',
'end' => '26654900',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-001'
),
'ENSDART00000154027' => array(
'start' => '26653015',
'end' => '26653558',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-007'
),
'ENSDART00000154128' => array(
'start' => '26652348',
'end' => '26654804',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-005'
),
'ENSDART00000154706' => array(
'start' => '26653931',
'end' => '26655523',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-003'
),
'ENSDART00000154800' => array(
'start' => '26652672',
'end' => '26655976',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-011'
),
'ENSDART00000155420' => array(
'start' => '26652180',
'end' => '26655528',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-002'
),
'ENSDART00000155627' => array(
'start' => '26652576',
'end' => '26653283',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-008'
),
'ENSDART00000155944' => array(
'start' => '26652408',
'end' => '26655523',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-010'
),
'ENSDART00000156217' => array(
'start' => '26652838',
'end' => '26654737',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-009'
),
'ENSDART00000156379' => array(
'start' => '26652176',
'end' => '26654789',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-006'
),
'ENSDART00000024207' => array(
'start' => '57913901',
'end' => '57923009',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx2a-001'
),
'ENSDART00000154265' => array(
'start' => '57883917',
'end' => '57917387',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-199d18.3-001'
),
'ENSDART00000155869' => array(
'start' => '57899917',
'end' => '57915982',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-199d18.3-002'
)
),
'accession_map' => array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
),
'sci_name_map' => array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
),
'UCSC_links' => array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
),
'expressed_region_arr' => array(
'CIL_0007JV_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0002' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0004' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0005' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
)
)
$region_arr = array(
'CIL_0007JV_0001' => array(
'genes_in_region' => array(
'ENSG00000108506' => array(
[maximum depth reached]
),
'ENSG00000108510' => array(
[maximum depth reached]
),
'ENSG00000121068' => array(
[maximum depth reached]
),
'ENSG00000121075' => array(
[maximum depth reached]
),
'ENSG00000136492' => array(
[maximum depth reached]
),
'ENSG00000141376' => array(
[maximum depth reached]
),
'ENSG00000187013' => array(
[maximum depth reached]
),
'ENSG00000202361' => array(
[maximum depth reached]
),
'ENSG00000253506' => array(
[maximum depth reached]
),
'ENSG00000266934' => array(
[maximum depth reached]
),
'ENSG00000267137' => array(
[maximum depth reached]
),
'ENSG00000267280' => array(
[maximum depth reached]
),
'ENSG00000267667' => array(
[maximum depth reached]
),
'ENSG00000273982' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Breast',
(int) 1 => 'Colon',
(int) 2 => 'Lung',
(int) 3 => 'Muscle',
(int) 4 => 'Testis',
(int) 5 => 'Lung',
(int) 6 => 'Testis',
(int) 7 => 'Adipose',
(int) 8 => 'Adrenal',
(int) 9 => 'Bladder',
(int) 10 => 'Brain',
(int) 11 => 'Breast',
(int) 12 => 'Colon',
(int) 13 => 'Heart',
(int) 14 => 'Kidney',
(int) 15 => 'Liver',
(int) 16 => 'Lung',
(int) 17 => 'Muscle',
(int) 18 => 'Ovary',
(int) 19 => 'Placenta',
(int) 20 => 'Testis',
(int) 21 => 'Adipose',
(int) 22 => 'Adrenal',
(int) 23 => 'Bladder',
(int) 24 => 'Brain',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Heart',
(int) 28 => 'Kidney',
(int) 29 => 'Liver',
(int) 30 => 'Lung',
(int) 31 => 'Muscle',
(int) 32 => 'Ovary',
(int) 33 => 'Placenta',
(int) 34 => 'Testis',
(int) 35 => 'Adipose',
(int) 36 => 'Adrenal',
(int) 37 => 'Bladder',
(int) 38 => 'Brain',
(int) 39 => 'Breast',
(int) 40 => 'Colon',
(int) 41 => 'Heart',
(int) 42 => 'Kidney',
(int) 43 => 'Liver',
(int) 44 => 'Lung',
(int) 45 => 'Muscle',
(int) 46 => 'Ovary',
(int) 47 => 'Placenta',
(int) 48 => 'Testis',
(int) 49 => 'Adipose',
(int) 50 => 'Adrenal',
(int) 51 => 'Colon',
(int) 52 => 'Kidney',
(int) 53 => 'Liver',
(int) 54 => 'Ovary',
(int) 55 => 'Placenta',
(int) 56 => 'Testis',
(int) 57 => 'Adrenal',
(int) 58 => 'Bladder',
(int) 59 => 'Brain',
(int) 60 => 'Breast',
(int) 61 => 'Colon',
(int) 62 => 'Heart',
(int) 63 => 'Kidney',
(int) 64 => 'Liver',
(int) 65 => 'Lung',
(int) 66 => 'Ovary',
(int) 67 => 'Testis',
(int) 68 => 'Adipose',
(int) 69 => 'Adrenal',
(int) 70 => 'Brain',
(int) 71 => 'Breast',
(int) 72 => 'Colon',
(int) 73 => 'Kidney',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Placenta',
(int) 77 => 'Testis',
(int) 78 => 'Adipose',
(int) 79 => 'Heart',
(int) 80 => 'Lung',
(int) 81 => 'Muscle',
(int) 82 => 'Ovary',
(int) 83 => 'Placenta',
(int) 84 => 'Testis',
(int) 85 => 'Adipose',
(int) 86 => 'Breast',
(int) 87 => 'Heart',
(int) 88 => 'Liver',
(int) 89 => 'Adrenal',
(int) 90 => 'Colon',
(int) 91 => 'Kidney',
(int) 92 => 'Liver',
(int) 93 => 'Adipose',
(int) 94 => 'Lung',
(int) 95 => 'Ovary',
(int) 96 => 'Adipose',
(int) 97 => 'Adrenal',
(int) 98 => 'Bladder',
(int) 99 => 'Brain',
(int) 100 => 'Breast',
(int) 101 => 'Colon',
(int) 102 => 'Heart',
(int) 103 => 'Kidney',
(int) 104 => 'Liver',
(int) 105 => 'Lung',
(int) 106 => 'Muscle',
(int) 107 => 'Ovary',
(int) 108 => 'Placenta',
(int) 109 => 'Testis',
(int) 110 => 'Brain',
(int) 111 => 'Colon',
(int) 112 => 'Liver',
(int) 113 => 'Lung',
(int) 114 => 'Muscle',
(int) 115 => 'Placenta',
(int) 116 => 'Adipose',
(int) 117 => 'Adrenal',
(int) 118 => 'Breast',
(int) 119 => 'Lung',
(int) 120 => 'Muscle',
(int) 121 => 'Adipose',
(int) 122 => 'Adrenal',
(int) 123 => 'Brain',
(int) 124 => 'Heart',
(int) 125 => 'Muscle',
(int) 126 => 'Placenta',
(int) 127 => 'Testis',
(int) 128 => 'Adipose',
(int) 129 => 'Brain',
(int) 130 => 'Colon',
(int) 131 => 'Heart',
(int) 132 => 'Kidney',
(int) 133 => 'Liver',
(int) 134 => 'Ovary',
(int) 135 => 'Placenta',
(int) 136 => 'Testis',
(int) 137 => 'Ovary',
(int) 138 => 'Placenta',
(int) 139 => 'Breast',
(int) 140 => 'Muscle',
(int) 141 => 'Ovary',
(int) 142 => 'Placenta',
(int) 143 => 'Testis',
(int) 144 => 'Ovary',
(int) 145 => 'Lung',
(int) 146 => 'Ovary',
(int) 147 => 'Breast',
(int) 148 => 'Adipose',
(int) 149 => 'Adrenal',
(int) 150 => 'Bladder',
(int) 151 => 'Adrenal',
(int) 152 => 'Bladder',
(int) 153 => 'Brain',
(int) 154 => 'Breast',
(int) 155 => 'Colon',
(int) 156 => 'Heart',
(int) 157 => 'Kidney',
(int) 158 => 'Liver',
(int) 159 => 'Lung',
(int) 160 => 'Muscle',
(int) 161 => 'Ovary',
(int) 162 => 'Placenta',
(int) 163 => 'Testis',
(int) 164 => 'Colon',
(int) 165 => 'Heart',
(int) 166 => 'Liver',
(int) 167 => 'Testis',
(int) 168 => 'Ovary',
(int) 169 => 'Muscle',
(int) 170 => 'Bladder',
(int) 171 => 'Brain',
(int) 172 => 'Breast',
(int) 173 => 'Colon',
(int) 174 => 'Heart',
(int) 175 => 'Kidney',
(int) 176 => 'Liver',
(int) 177 => 'Lung',
(int) 178 => 'Ovary',
(int) 179 => 'Adipose',
(int) 180 => 'Adrenal',
(int) 181 => 'Brain',
(int) 182 => 'Breast',
(int) 183 => 'Colon',
(int) 184 => 'Heart',
(int) 185 => 'Kidney',
(int) 186 => 'Liver',
(int) 187 => 'Lung',
(int) 188 => 'Muscle',
(int) 189 => 'Ovary',
(int) 190 => 'Placenta',
(int) 191 => 'Testis',
(int) 192 => 'Testis',
(int) 193 => 'Adipose',
(int) 194 => 'Adrenal',
(int) 195 => 'Brain',
(int) 196 => 'Breast',
(int) 197 => 'Colon',
(int) 198 => 'Heart',
(int) 199 => 'Kidney',
(int) 200 => 'Liver',
(int) 201 => 'Lung',
(int) 202 => 'Muscle',
(int) 203 => 'Ovary',
(int) 204 => 'Placenta',
(int) 205 => 'Testis',
(int) 206 => 'Adrenal',
(int) 207 => 'Bladder',
(int) 208 => 'Brain',
(int) 209 => 'Heart',
(int) 210 => 'Kidney',
(int) 211 => 'Muscle',
(int) 212 => 'Ovary',
(int) 213 => 'Placenta',
(int) 214 => 'Testis',
(int) 215 => 'Adrenal',
(int) 216 => 'Brain',
(int) 217 => 'Heart',
(int) 218 => 'Kidney',
(int) 219 => 'Lung',
(int) 220 => 'Ovary',
(int) 221 => 'Testis',
(int) 222 => 'Lung',
(int) 223 => 'Testis',
(int) 224 => 'Lung',
(int) 225 => 'Breast',
(int) 226 => 'Liver',
(int) 227 => 'Testis',
(int) 228 => 'Adipose',
(int) 229 => 'Adrenal',
(int) 230 => 'Brain',
(int) 231 => 'Colon',
(int) 232 => 'Heart',
(int) 233 => 'Kidney',
(int) 234 => 'Lung',
(int) 235 => 'Muscle',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta',
(int) 238 => 'Testis',
(int) 239 => 'Adipose',
(int) 240 => 'Adrenal',
(int) 241 => 'Bladder',
(int) 242 => 'Kidney',
(int) 243 => 'Muscle',
(int) 244 => 'Ovary',
(int) 245 => 'Placenta',
(int) 246 => 'Testis',
(int) 247 => 'Breast',
(int) 248 => 'Lung',
(int) 249 => 'Muscle',
(int) 250 => 'Ovary',
(int) 251 => 'Adipose',
(int) 252 => 'Adrenal',
(int) 253 => 'Brain',
(int) 254 => 'Breast',
(int) 255 => 'Colon',
(int) 256 => 'Heart',
(int) 257 => 'Liver',
(int) 258 => 'Lung',
(int) 259 => 'Muscle',
(int) 260 => 'Ovary',
(int) 261 => 'Placenta',
(int) 262 => 'Testis',
(int) 263 => 'Adrenal',
(int) 264 => 'Heart',
(int) 265 => 'Kidney',
(int) 266 => 'Lung',
(int) 267 => 'Ovary'
)
),
'CIL_0007JV_0002' => array(
'genes_in_region' => array(
'ENSMUSG00000000093' => array(
[maximum depth reached]
),
'ENSMUSG00000000094' => array(
[maximum depth reached]
),
'ENSMUSG00000018068' => array(
[maximum depth reached]
),
'ENSMUSG00000034297' => array(
[maximum depth reached]
),
'ENSMUSG00000034329' => array(
[maximum depth reached]
),
'ENSMUSG00000059439' => array(
[maximum depth reached]
),
'ENSMUSG00000069785' => array(
[maximum depth reached]
),
'ENSMUSG00000080823' => array(
[maximum depth reached]
),
'ENSMUSG00000085208' => array(
[maximum depth reached]
),
'ENSMUSG00000085514' => array(
[maximum depth reached]
),
'ENSMUSG00000086199' => array(
[maximum depth reached]
),
'ENSMUSG00000087013' => array(
[maximum depth reached]
),
'ENSMUSG00000089508' => array(
[maximum depth reached]
),
'ENSMUSG00000093278' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Bladder',
(int) 3 => 'Brain',
(int) 4 => 'Breast',
(int) 5 => 'Colon',
(int) 6 => 'Heart',
(int) 7 => 'Kidney',
(int) 8 => 'Liver',
(int) 9 => 'Lung',
(int) 10 => 'Muscle',
(int) 11 => 'Ovary',
(int) 12 => 'Placenta',
(int) 13 => 'Testis',
(int) 14 => 'Adipose',
(int) 15 => 'Bladder',
(int) 16 => 'Breast',
(int) 17 => 'Heart',
(int) 18 => 'Kidney',
(int) 19 => 'Liver',
(int) 20 => 'Lung',
(int) 21 => 'Muscle',
(int) 22 => 'Placenta',
(int) 23 => 'Testis',
(int) 24 => 'Adipose',
(int) 25 => 'Adrenal',
(int) 26 => 'Bladder',
(int) 27 => 'Brain',
(int) 28 => 'Breast',
(int) 29 => 'Colon',
(int) 30 => 'Heart',
(int) 31 => 'Kidney',
(int) 32 => 'Liver',
(int) 33 => 'Muscle',
(int) 34 => 'Ovary',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Bladder',
(int) 38 => 'Brain',
(int) 39 => 'Heart',
(int) 40 => 'Liver',
(int) 41 => 'Lung',
(int) 42 => 'Muscle',
(int) 43 => 'Placenta',
(int) 44 => 'Adipose',
(int) 45 => 'Adrenal',
(int) 46 => 'Bladder',
(int) 47 => 'Brain',
(int) 48 => 'Colon',
(int) 49 => 'Kidney',
(int) 50 => 'Liver',
(int) 51 => 'Ovary',
(int) 52 => 'Placenta',
(int) 53 => 'Testis',
(int) 54 => 'Adipose',
(int) 55 => 'Adrenal',
(int) 56 => 'Brain',
(int) 57 => 'Colon',
(int) 58 => 'Ovary',
(int) 59 => 'Placenta',
(int) 60 => 'Testis',
(int) 61 => 'Adipose',
(int) 62 => 'Adrenal',
(int) 63 => 'Bladder',
(int) 64 => 'Brain',
(int) 65 => 'Breast',
(int) 66 => 'Colon',
(int) 67 => 'Heart',
(int) 68 => 'Kidney',
(int) 69 => 'Liver',
(int) 70 => 'Lung',
(int) 71 => 'Muscle',
(int) 72 => 'Ovary',
(int) 73 => 'Placenta',
(int) 74 => 'Testis',
(int) 75 => 'Adipose',
(int) 76 => 'Adrenal',
(int) 77 => 'Bladder',
(int) 78 => 'Brain',
(int) 79 => 'Breast',
(int) 80 => 'Colon',
(int) 81 => 'Heart',
(int) 82 => 'Kidney',
(int) 83 => 'Liver',
(int) 84 => 'Lung',
(int) 85 => 'Muscle',
(int) 86 => 'Ovary',
(int) 87 => 'Placenta',
(int) 88 => 'Testis',
(int) 89 => 'Breast',
(int) 90 => 'Colon',
(int) 91 => 'Ovary',
(int) 92 => 'Colon',
(int) 93 => 'Muscle',
(int) 94 => 'Brain',
(int) 95 => 'Brain',
(int) 96 => 'Breast',
(int) 97 => 'Liver',
(int) 98 => 'Ovary',
(int) 99 => 'Placenta',
(int) 100 => 'Testis',
(int) 101 => 'Muscle',
(int) 102 => 'Ovary',
(int) 103 => 'Colon',
(int) 104 => 'Heart',
(int) 105 => 'Muscle',
(int) 106 => 'Testis',
(int) 107 => 'Adipose',
(int) 108 => 'Adrenal',
(int) 109 => 'Bladder',
(int) 110 => 'Brain',
(int) 111 => 'Breast',
(int) 112 => 'Colon',
(int) 113 => 'Heart',
(int) 114 => 'Kidney',
(int) 115 => 'Liver',
(int) 116 => 'Lung',
(int) 117 => 'Muscle',
(int) 118 => 'Ovary',
(int) 119 => 'Placenta',
(int) 120 => 'Testis',
(int) 121 => 'Bladder',
(int) 122 => 'Placenta',
(int) 123 => 'Adrenal',
(int) 124 => 'Ovary',
(int) 125 => 'Placenta',
(int) 126 => 'Adipose',
(int) 127 => 'Adrenal',
(int) 128 => 'Bladder',
(int) 129 => 'Brain',
(int) 130 => 'Breast',
(int) 131 => 'Colon',
(int) 132 => 'Heart',
(int) 133 => 'Kidney',
(int) 134 => 'Liver',
(int) 135 => 'Lung',
(int) 136 => 'Muscle',
(int) 137 => 'Ovary',
(int) 138 => 'Placenta',
(int) 139 => 'Testis',
(int) 140 => 'Adrenal',
(int) 141 => 'Brain',
(int) 142 => 'Breast',
(int) 143 => 'Kidney',
(int) 144 => 'Lung',
(int) 145 => 'Ovary',
(int) 146 => 'Testis',
(int) 147 => 'Adipose',
(int) 148 => 'Bladder',
(int) 149 => 'Brain',
(int) 150 => 'Breast',
(int) 151 => 'Heart',
(int) 152 => 'Kidney',
(int) 153 => 'Liver',
(int) 154 => 'Muscle',
(int) 155 => 'Ovary',
(int) 156 => 'Placenta',
(int) 157 => 'Adipose',
(int) 158 => 'Adrenal',
(int) 159 => 'Bladder',
(int) 160 => 'Brain',
(int) 161 => 'Breast',
(int) 162 => 'Colon',
(int) 163 => 'Heart',
(int) 164 => 'Kidney',
(int) 165 => 'Liver',
(int) 166 => 'Lung',
(int) 167 => 'Ovary',
(int) 168 => 'Placenta',
(int) 169 => 'Adipose',
(int) 170 => 'Adrenal',
(int) 171 => 'Bladder',
(int) 172 => 'Brain',
(int) 173 => 'Breast',
(int) 174 => 'Colon',
(int) 175 => 'Heart',
(int) 176 => 'Kidney',
(int) 177 => 'Liver',
(int) 178 => 'Lung',
(int) 179 => 'Ovary',
(int) 180 => 'Placenta',
(int) 181 => 'Testis',
(int) 182 => 'Brain',
(int) 183 => 'Heart',
(int) 184 => 'Kidney',
(int) 185 => 'Liver',
(int) 186 => 'Lung',
(int) 187 => 'Muscle',
(int) 188 => 'Ovary',
(int) 189 => 'Placenta',
(int) 190 => 'Testis',
(int) 191 => 'Adipose',
(int) 192 => 'Adrenal',
(int) 193 => 'Brain',
(int) 194 => 'Breast',
(int) 195 => 'Colon',
(int) 196 => 'Heart',
(int) 197 => 'Kidney',
(int) 198 => 'Liver',
(int) 199 => 'Muscle',
(int) 200 => 'Ovary',
(int) 201 => 'Placenta',
(int) 202 => 'Testis',
(int) 203 => 'Liver',
(int) 204 => 'Bladder',
(int) 205 => 'Lung',
(int) 206 => 'Bladder',
(int) 207 => 'Ovary',
(int) 208 => 'Testis',
(int) 209 => 'Heart'
)
),
'CIL_0007JV_0004' => array(
'genes_in_region' => array(
'ENSDARG00000006120' => array(
[maximum depth reached]
),
'ENSDARG00000030058' => array(
[maximum depth reached]
),
'ENSDARG00000074410' => array(
[maximum depth reached]
),
'ENSDARG00000086181' => array(
[maximum depth reached]
),
'ENSDARG00000090764' => array(
[maximum depth reached]
),
'ENSDARG00000096918' => array(
[maximum depth reached]
),
'ENSDARG00000097072' => array(
[maximum depth reached]
),
'ENSDARG00000097266' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Brain',
(int) 4 => 'Heart',
(int) 5 => 'Liver',
(int) 6 => 'Brain',
(int) 7 => 'Heart',
(int) 8 => 'Kidney',
(int) 9 => 'Brain',
(int) 10 => 'Kidney',
(int) 11 => 'Brain',
(int) 12 => 'Heart',
(int) 13 => 'Kidney',
(int) 14 => 'Brain',
(int) 15 => 'Heart',
(int) 16 => 'Kidney',
(int) 17 => 'Muscle',
(int) 18 => 'Brain',
(int) 19 => 'Heart',
(int) 20 => 'Kidney',
(int) 21 => 'Liver',
(int) 22 => 'Muscle',
(int) 23 => 'Brain',
(int) 24 => 'Heart',
(int) 25 => 'Kidney',
(int) 26 => 'Muscle',
(int) 27 => 'Brain',
(int) 28 => 'Heart',
(int) 29 => 'Kidney',
(int) 30 => 'Liver',
(int) 31 => 'Muscle',
(int) 32 => 'Brain',
(int) 33 => 'Brain',
(int) 34 => 'Heart',
(int) 35 => 'Kidney',
(int) 36 => 'Liver',
(int) 37 => 'Muscle',
(int) 38 => 'Brain',
(int) 39 => 'Heart',
(int) 40 => 'Kidney',
(int) 41 => 'Liver',
(int) 42 => 'Brain',
(int) 43 => 'Muscle',
(int) 44 => 'Heart',
(int) 45 => 'Brain',
(int) 46 => 'Heart',
(int) 47 => 'Kidney',
(int) 48 => 'Muscle',
(int) 49 => 'Brain',
(int) 50 => 'Heart',
(int) 51 => 'Kidney',
(int) 52 => 'Brain',
(int) 53 => 'Kidney',
(int) 54 => 'Brain',
(int) 55 => 'Brain',
(int) 56 => 'Heart',
(int) 57 => 'Brain'
)
),
'CIL_0007JV_0005' => array(
'genes_in_region' => array(
'ENSDARG00000018025' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Liver',
(int) 4 => 'Muscle',
(int) 5 => 'Kidney'
)
)
)
$gene_desc_arr = array(
'ENSG00000108506' => 'integrator complex subunit 2',
'ENSG00000108510' => 'mediator complex subunit 13',
'ENSG00000121068' => 'T-box 2',
'ENSG00000121075' => 'T-box 4',
'ENSG00000136492' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSG00000141376' => 'breast carcinoma amplified sequence 3',
'ENSG00000187013' => 'chromosome 17 open reading frame 82',
'ENSG00000202361' => 'Y RNA',
'ENSG00000253506' => 'nascent polypeptide-associated complex alpha subunit 2',
'ENSG00000266934' => null,
'ENSG00000267131' => null,
'ENSG00000267137' => null,
'ENSG00000267280' => 'TBX2 antisense RNA 1',
'ENSG00000267667' => null,
'ENSG00000273982' => null,
'ENSG00000278751' => null,
'ENSMUSG00000000093' => 'T-box 2',
'ENSMUSG00000000094' => 'T-box 4',
'ENSMUSG00000018068' => 'integrator complex subunit 2',
'ENSMUSG00000034297' => 'mediator complex subunit 13',
'ENSMUSG00000034329' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSMUSG00000059439' => 'breast carcinoma amplified sequence 3',
'ENSMUSG00000069785' => 'predicted gene 11444',
'ENSMUSG00000080823' => 'ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, pseudogene 2',
'ENSMUSG00000081632' => 'predicted gene 11443',
'ENSMUSG00000085208' => 'BRCA1 interacting protein C-terminal helicase 1, opposite strand',
'ENSMUSG00000085514' => 'breast carcinoma amplified sequence 3 opposite strand 2',
'ENSMUSG00000086199' => 'breast carcinoma amplified sequence 3, opposite strand 1',
'ENSMUSG00000087013' => 'RIKEN cDNA 2610027K06 gene',
'ENSMUSG00000089508' => 'predicted gene, 23473',
'ENSMUSG00000093278' => 'microRNA 5110',
'ENSDARG00000006120' => 'T-box 2b',
'ENSDARG00000030058' => 'T-box 4',
'ENSDARG00000074410' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSDARG00000084002' => '5S ribosomal RNA',
'ENSDARG00000086181' => 'Uncharacterized protein',
'ENSDARG00000090764' => 'breast carcinoma amplified sequence 3',
'ENSDARG00000096918' => 'si:ch211-229g11.3',
'ENSDARG00000097072' => 'si:ch211-229g11.6',
'ENSDARG00000097266' => 'si:ch211-229g11.5',
'ENSDARG00000018025' => 'T-box gene 2a',
'ENSDARG00000097120' => 'si:ch211-199d18.3'
)
$gene_name_arr = array(
'ENSG00000108506' => 'INTS2',
'ENSG00000108510' => 'MED13',
'ENSG00000121068' => 'TBX2',
'ENSG00000121075' => 'TBX4',
'ENSG00000136492' => 'BRIP1',
'ENSG00000141376' => 'BCAS3',
'ENSG00000187013' => 'C17orf82',
'ENSG00000202361' => 'Y_RNA',
'ENSG00000253506' => 'NACA2',
'ENSG00000266934' => 'RP11-332H18.3',
'ENSG00000267131' => 'RP11-332H18.5',
'ENSG00000267137' => 'RP11-15K2.2',
'ENSG00000267280' => 'TBX2-AS1',
'ENSG00000267667' => 'RP11-136H19.1',
'ENSG00000273982' => 'RP11-332H18.7',
'ENSG00000278751' => 'AC005901.1',
'ENSMUSG00000000093' => 'Tbx2',
'ENSMUSG00000000094' => 'Tbx4',
'ENSMUSG00000018068' => 'Ints2',
'ENSMUSG00000034297' => 'Med13',
'ENSMUSG00000034329' => 'Brip1',
'ENSMUSG00000059439' => 'Bcas3',
'ENSMUSG00000069785' => 'Gm11444',
'ENSMUSG00000080823' => 'Atp5l-ps2',
'ENSMUSG00000081632' => 'Gm11443',
'ENSMUSG00000085208' => 'Brip1os',
'ENSMUSG00000085514' => 'Bcas3os2',
'ENSMUSG00000086199' => 'Bcas3os1',
'ENSMUSG00000087013' => '2610027K06Rik',
'ENSMUSG00000089508' => 'Gm23473',
'ENSMUSG00000093278' => 'Mir5110',
'ENSDARG00000006120' => 'tbx2b',
'ENSDARG00000030058' => 'tbx4',
'ENSDARG00000074410' => 'brip1',
'ENSDARG00000084002' => '5S_rRNA',
'ENSDARG00000086181' => 'BX005052.1',
'ENSDARG00000090764' => 'bcas3',
'ENSDARG00000096918' => 'si:ch211-229g11.3',
'ENSDARG00000097072' => 'si:ch211-229g11.6',
'ENSDARG00000097266' => 'si:ch211-229g11.5',
'ENSDARG00000018025' => 'tbx2a',
'ENSDARG00000097120' => 'si:ch211-199d18.3'
)
$accession_table = array(
(int) 0 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0001',
'tax_id' => '9606',
'chromosome' => '17',
'seq_start' => '61126460',
'seq_end' => '61946035',
'region_length' => '819575',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
),
(int) 1 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0002',
'tax_id' => '10090',
'chromosome' => '11',
'seq_start' => '85613059',
'seq_end' => '86270571',
'region_length' => '657512',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
),
(int) 2 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0003',
'tax_id' => '7955',
'chromosome' => '10',
'seq_start' => '28712083',
'seq_end' => '28712350',
'region_length' => '267',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
),
(int) 3 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0004',
'tax_id' => '7955',
'chromosome' => '15',
'seq_start' => '26449307',
'seq_end' => '26854804',
'region_length' => '405497',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
),
(int) 4 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0005',
'tax_id' => '7955',
'chromosome' => '5',
'seq_start' => '57841765',
'seq_end' => '58150987',
'region_length' => '309222',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
)
)
$all_tissues = array(
(int) 0 => 'Adipose',
(int) 31 => 'Adrenal',
(int) 64 => 'Bladder',
(int) 89 => 'Brain',
(int) 143 => 'Breast',
(int) 175 => 'Colon',
(int) 207 => 'Heart',
(int) 256 => 'Kidney',
(int) 303 => 'Liver',
(int) 342 => 'Lung',
(int) 378 => 'Muscle',
(int) 419 => 'Ovary',
(int) 464 => 'Placenta',
(int) 501 => 'Testis'
)
$column_titles = array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
)
$geneviewer = array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCh38.2bit',
'bwgURI' => '/static/files/GRCh38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 10090 => array(
'version' => 'GRCm38',
'coord_key' => 'Mus musculus',
'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCm38.2bit',
'bwgURI' => '/static/files/GRCm38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 7955 => array(
'version' => 'Zv9',
'coord_key' => 'Danio rerio',
'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
'twoBitURI' => '/static/files/Zv9.2bit',
'bwgURI' => '/static/files/Zv9.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
)
)
$transcript_count = (int) 160
$longest_tissue_len = (int) 8
$transcript_data = array(
'ENST00000251334' => array(
'start' => '61867249',
'end' => '61927991',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-002'
),
'ENST00000444766' => array(
'start' => '61865370',
'end' => '61928016',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-001'
),
'ENST00000578805' => array(
'start' => '61891577',
'end' => '61894186',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-004'
),
'ENST00000583076' => array(
'start' => '61926408',
'end' => '61927426',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-003'
),
'ENST00000583822' => array(
'start' => '61872023',
'end' => '61885005',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-006'
),
'ENST00000584967' => array(
'start' => '61877981',
'end' => '61885290',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-005'
),
'ENST00000617492' => array(
'start' => '61865367',
'end' => '61927105',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-201'
),
'ENST00000397786' => array(
'start' => '61942605',
'end' => '62065282',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MED13-001'
),
'ENST00000578132' => array(
'start' => '62029298',
'end' => '62033825',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MED13-005'
),
'ENST00000580896' => array(
'start' => '62031513',
'end' => '62032473',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MED13-004'
),
'ENST00000581994' => array(
'start' => '62029277',
'end' => '62031489',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MED13-002'
),
'ENST00000582786' => array(
'start' => '61955311',
'end' => '61955763',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MED13-006'
),
'ENST00000583958' => array(
'start' => '62010427',
'end' => '62030000',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MED13-003'
),
'ENST00000240328' => array(
'start' => '61399896',
'end' => '61409425',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX2-001'
),
'ENST00000419047' => array(
'start' => '61399910',
'end' => '61409466',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'TBX2-002'
),
'ENST00000477081' => array(
'start' => '61400365',
'end' => '61409124',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TBX2-003'
),
'ENST00000586986' => array(
'start' => '61408722',
'end' => '61409466',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX2-005'
),
'ENST00000240335' => array(
'start' => '61456446',
'end' => '61484303',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX4-002'
),
'ENST00000393853' => array(
'start' => '61452418',
'end' => '61485110',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX4-001'
),
'ENST00000586874' => array(
'start' => '61478363',
'end' => '61481346',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX4-007'
),
'ENST00000589003' => array(
'start' => '61452404',
'end' => '61478740',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX4-003'
),
'ENST00000589449' => array(
'start' => '61478351',
'end' => '61483370',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX4-006'
),
'ENST00000590174' => array(
'start' => '61465793',
'end' => '61480275',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TBX4-008'
),
'ENST00000593249' => array(
'start' => '61464214',
'end' => '61478789',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX4-005'
),
'ENST00000259008' => array(
'start' => '61681266',
'end' => '61863521',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-001'
),
'ENST00000577598' => array(
'start' => '61684772',
'end' => '61861539',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-002'
),
'ENST00000577913' => array(
'start' => '61857228',
'end' => '61863344',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-003'
),
'ENST00000579028' => array(
'start' => '61776401',
'end' => '61793673',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'BRIP1-005'
),
'ENST00000583837' => array(
'start' => '61775878',
'end' => '61780277',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BRIP1-004'
),
'ENST00000584322' => array(
'start' => '61739057',
'end' => '61776480',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-006'
),
'ENST00000390652' => array(
'start' => '60677889',
'end' => '61392838',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-001'
),
'ENST00000407086' => array(
'start' => '60677872',
'end' => '61392831',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-002'
),
'ENST00000408905' => array(
'start' => '60679458',
'end' => '61392831',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-013'
),
'ENST00000585744' => array(
'start' => '60887050',
'end' => '61392125',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-005'
),
'ENST00000585812' => array(
'start' => '61157456',
'end' => '61392831',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-008'
),
'ENST00000585979' => array(
'start' => '61016962',
'end' => '61368342',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-028'
),
'ENST00000586041' => array(
'start' => '60889761',
'end' => '60980605',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-025'
),
'ENST00000586241' => array(
'start' => '60677892',
'end' => '60874738',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'BCAS3-018'
),
'ENST00000586484' => array(
'start' => '60887279',
'end' => '60989988',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-023'
),
'ENST00000586705' => array(
'start' => '60886383',
'end' => '60947253',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-022'
),
'ENST00000587002' => array(
'start' => '61078441',
'end' => '61368410',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-032'
),
'ENST00000587037' => array(
'start' => '61002557',
'end' => '61037903',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-027'
),
'ENST00000587294' => array(
'start' => '61159362',
'end' => '61392182',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-031'
),
'ENST00000587872' => array(
'start' => '61377830',
'end' => '61380572',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'BCAS3-011'
),
'ENST00000588008' => array(
'start' => '61084505',
'end' => '61087498',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-030'
),
'ENST00000588168' => array(
'start' => '60677453',
'end' => '60747282',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-014'
),
'ENST00000588462' => array(
'start' => '60679458',
'end' => '61392831',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-012'
),
'ENST00000588532' => array(
'start' => '60677879',
'end' => '60709266',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'BCAS3-017'
),
'ENST00000588569' => array(
'start' => '61245260',
'end' => '61392273',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-033'
),
'ENST00000588720' => array(
'start' => '61388276',
'end' => '61392831',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'BCAS3-010'
),
'ENST00000588874' => array(
'start' => '60887050',
'end' => '61392830',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-006'
),
'ENST00000589222' => array(
'start' => '60677852',
'end' => '61392831',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-004'
),
'ENST00000589916' => array(
'start' => '60677868',
'end' => '60808094',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'BCAS3-020'
),
'ENST00000590128' => array(
'start' => '60887239',
'end' => '60947352',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-024'
),
'ENST00000590352' => array(
'start' => '60986857',
'end' => '61015785',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-026'
),
'ENST00000591147' => array(
'start' => '60677848',
'end' => '60747279',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'BCAS3-015'
),
'ENST00000591371' => array(
'start' => '60677857',
'end' => '60747222',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-019'
),
'ENST00000592393' => array(
'start' => '60677892',
'end' => '60821775',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-021'
),
'ENST00000592702' => array(
'start' => '61245216',
'end' => '61392831',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-009'
),
'ENST00000592827' => array(
'start' => '61016964',
'end' => '61074988',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-029'
),
'ENST00000592848' => array(
'start' => '60677887',
'end' => '60889742',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'BCAS3-016'
),
'ENST00000593004' => array(
'start' => '60677866',
'end' => '60720356',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BCAS3-034'
),
'ENST00000613443' => array(
'start' => '60677889',
'end' => '61084567',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-201'
),
'ENST00000614888' => array(
'start' => '60677889',
'end' => '61084567',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-202'
),
'ENST00000335108' => array(
'start' => '61411751',
'end' => '61413280',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'C17orf82-201'
),
'ENST00000623772' => array(
'start' => '61411751',
'end' => '61413280',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'C17orf82-001'
),
'ENST00000365491' => array(
'start' => '61874084',
'end' => '61874182',
'transcript_biotype' => 'misc_RNA',
'transcript_name' => 'Y_RNA.1-560'
),
'ENST00000521764' => array(
'start' => '61590426',
'end' => '61591202',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'NACA2-001'
),
'ENST00000585495' => array(
'start' => '61383401',
'end' => '61384680',
'transcript_biotype' => 'sense_intronic',
'transcript_name' => 'RP11-332H18.3-001'
),
'ENST00000589244' => array(
'start' => '61382785',
'end' => '61383555',
'transcript_biotype' => 'sense_intronic',
'transcript_name' => 'RP11-332H18.3-002'
),
'ENST00000585765' => array(
'start' => '61361668',
'end' => '61400243',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-332H18.5-001'
),
'ENST00000592766' => array(
'start' => '61460224',
'end' => '61463384',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-15K2.2-001'
),
'ENST00000586706' => array(
'start' => '61393458',
'end' => '61395447',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-005'
),
'ENST00000589814' => array(
'start' => '61393458',
'end' => '61399370',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-004'
),
'ENST00000590421' => array(
'start' => '61393457',
'end' => '61399606',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-002'
),
'ENST00000591313' => array(
'start' => '61393458',
'end' => '61399588',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-003'
),
'ENST00000592009' => array(
'start' => '61393458',
'end' => '61411555',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-001'
),
'ENST00000592377' => array(
'start' => '61393456',
'end' => '61394062',
'transcript_biotype' => 'antisense',
'transcript_name' => 'TBX2-AS1-006'
),
'ENST00000585921' => array(
'start' => '61130704',
'end' => '61135964',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-136H19.1-001'
),
'ENST00000614751' => array(
'start' => '61354763',
'end' => '61355155',
'transcript_biotype' => 'antisense',
'transcript_name' => 'RP11-332H18.7-001'
),
'ENST00000616674' => array(
'start' => '61485684',
'end' => '61485801',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'AC005901.1-201'
),
'ENSMUST00000000095' => array(
'start' => '85832551',
'end' => '85841948',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Tbx2-001'
),
'ENSMUST00000000096' => array(
'start' => '85890063',
'end' => '85916097',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Tbx4-201'
),
'ENSMUST00000108045' => array(
'start' => '85896765',
'end' => '85916095',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Tbx4-002'
),
'ENSMUST00000108047' => array(
'start' => '85886422',
'end' => '85916095',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Tbx4-001'
),
'ENSMUST00000018212' => array(
'start' => '86210681',
'end' => '86257550',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ints2-001'
),
'ENSMUST00000108039' => array(
'start' => '86212088',
'end' => '86256546',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ints2-002'
),
'ENSMUST00000127745' => array(
'start' => '86235612',
'end' => '86238883',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ints2-009'
),
'ENSMUST00000130614' => array(
'start' => '86256353',
'end' => '86257340',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ints2-004'
),
'ENSMUST00000132024' => array(
'start' => '86255360',
'end' => '86257554',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ints2-005'
),
'ENSMUST00000134828' => array(
'start' => '86217809',
'end' => '86229233',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'Ints2-011'
),
'ENSMUST00000134883' => array(
'start' => '86234672',
'end' => '86257541',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ints2-008'
),
'ENSMUST00000136469' => array(
'start' => '86256026',
'end' => '86257518',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ints2-003'
),
'ENSMUST00000139285' => array(
'start' => '86251051',
'end' => '86257575',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Ints2-007'
),
'ENSMUST00000141756' => array(
'start' => '86256443',
'end' => '86257565',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Ints2-006'
),
'ENSMUST00000146421' => array(
'start' => '86224943',
'end' => '86232176',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Ints2-010'
),
'ENSMUST00000043624' => array(
'start' => '86267033',
'end' => '86357602',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Med13-001'
),
'ENSMUST00000136622' => array(
'start' => '86272547',
'end' => '86278600',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Med13-002'
),
'ENSMUST00000140514' => array(
'start' => '86275374',
'end' => '86278992',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Med13-003'
),
'ENSMUST00000144983' => array(
'start' => '86331006',
'end' => '86332183',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'Med13-004'
),
'ENSMUST00000044423' => array(
'start' => '86058138',
'end' => '86201193',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Brip1-001'
),
'ENSMUST00000123366' => array(
'start' => '86195699',
'end' => '86201166',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Brip1-003'
),
'ENSMUST00000149748' => array(
'start' => '86195033',
'end' => '86201164',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Brip1-002'
),
'ENSMUST00000074875' => array(
'start' => '85353212',
'end' => '85825350',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-201'
),
'ENSMUST00000092821' => array(
'start' => '85353212',
'end' => '85825350',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-202'
),
'ENSMUST00000092822' => array(
'start' => '85509638',
'end' => '85826058',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-006'
),
'ENSMUST00000108056' => array(
'start' => '85353167',
'end' => '85510991',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-003'
),
'ENSMUST00000108061' => array(
'start' => '85353167',
'end' => '85826058',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-001'
),
'ENSMUST00000108062' => array(
'start' => '85353167',
'end' => '85826058',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-002'
),
'ENSMUST00000130343' => array(
'start' => '85640704',
'end' => '85826055',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Bcas3-010'
),
'ENSMUST00000133194' => array(
'start' => '85581042',
'end' => '85603044',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Bcas3-011'
),
'ENSMUST00000138423' => array(
'start' => '85353185',
'end' => '85371163',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-014'
),
'ENSMUST00000140215' => array(
'start' => '85492568',
'end' => '85495914',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Bcas3-013'
),
'ENSMUST00000140562' => array(
'start' => '85821966',
'end' => '85825307',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Bcas3-009'
),
'ENSMUST00000142596' => array(
'start' => '85509627',
'end' => '85826058',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-005'
),
'ENSMUST00000144276' => array(
'start' => '85470752',
'end' => '85496993',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-012'
),
'ENSMUST00000145281' => array(
'start' => '85821413',
'end' => '85825646',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'Bcas3-008'
),
'ENSMUST00000149662' => array(
'start' => '85801821',
'end' => '85825390',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-007'
),
'ENSMUST00000154396' => array(
'start' => '85466159',
'end' => '85826058',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Bcas3-004'
),
'ENSMUST00000146433' => array(
'start' => '85846790',
'end' => '85850333',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'Gm11444-001'
),
'ENSMUST00000121382' => array(
'start' => '86185329',
'end' => '86185642',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Atp5l-ps2-001'
),
'ENSMUST00000118790' => array(
'start' => '85950495',
'end' => '85950973',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm11443-001'
),
'ENSMUST00000128960' => array(
'start' => '86201370',
'end' => '86211192',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Brip1os-001'
),
'ENSMUST00000143819' => array(
'start' => '86201383',
'end' => '86304443',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Brip1os-002'
),
'ENSMUST00000134305' => array(
'start' => '85766831',
'end' => '85775680',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Bcas3os2-001'
),
'ENSMUST00000146806' => array(
'start' => '85704143',
'end' => '85719744',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Bcas3os1-001'
),
'ENSMUST00000151652' => array(
'start' => '85702200',
'end' => '85719744',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Bcas3os1-002'
),
'ENSMUST00000128213' => array(
'start' => '85795875',
'end' => '85804155',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => '2610027K06Rik-003'
),
'ENSMUST00000136117' => array(
'start' => '85795789',
'end' => '85832223',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => '2610027K06Rik-001'
),
'ENSMUST00000140673' => array(
'start' => '85791661',
'end' => '85832209',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => '2610027K06Rik-002'
),
'ENSMUST00000158883' => array(
'start' => '85778812',
'end' => '85778927',
'transcript_biotype' => 'rRNA',
'transcript_name' => 'Gm23473-201'
),
'ENSMUST00000175537' => array(
'start' => '85760616',
'end' => '85760702',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Mir5110-201'
),
'ENSDART00000005491' => array(
'start' => '26713725',
'end' => '26720073',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx2b-201'
),
'ENSDART00000122101' => array(
'start' => '26713282',
'end' => '26720228',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx2b-001'
),
'ENSDART00000018603' => array(
'start' => '26736443',
'end' => '26760093',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx4-001'
),
'ENSDART00000109262' => array(
'start' => '26801204',
'end' => '26871645',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'brip1-201'
),
'ENSDART00000112643' => array(
'start' => '26801206',
'end' => '26871275',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'brip1-001'
),
'ENSDART00000149374' => array(
'start' => '26863368',
'end' => '26871694',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'brip1-003'
),
'ENSDART00000119402' => array(
'start' => '26824146',
'end' => '26824262',
'transcript_biotype' => 'rRNA',
'transcript_name' => '5S_rRNA.463-201'
),
'ENSDART00000126452' => array(
'start' => '26516494',
'end' => '26522053',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BX005052.1-201'
),
'ENSDART00000077172' => array(
'start' => '26277623',
'end' => '26425706',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'bcas3-201'
),
'ENSDART00000079294' => array(
'start' => '26676983',
'end' => '26703644',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'bcas3-202'
),
'ENSDART00000149957' => array(
'start' => '26276820',
'end' => '26703647',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'bcas3-001'
),
'ENSDART00000157224' => array(
'start' => '26645564',
'end' => '26649721',
'transcript_biotype' => 'sense_intronic',
'transcript_name' => 'si:ch211-229g11.3-001'
),
'ENSDART00000155403' => array(
'start' => '26705713',
'end' => '26712956',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'si:ch211-229g11.6-001'
),
'ENSDART00000155933' => array(
'start' => '26706247',
'end' => '26713025',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'si:ch211-229g11.6-002'
),
'ENSDART00000153528' => array(
'start' => '26652718',
'end' => '26654988',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-004'
),
'ENSDART00000153757' => array(
'start' => '26652167',
'end' => '26654900',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-001'
),
'ENSDART00000154027' => array(
'start' => '26653015',
'end' => '26653558',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-007'
),
'ENSDART00000154128' => array(
'start' => '26652348',
'end' => '26654804',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-005'
),
'ENSDART00000154706' => array(
'start' => '26653931',
'end' => '26655523',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-003'
),
'ENSDART00000154800' => array(
'start' => '26652672',
'end' => '26655976',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-011'
),
'ENSDART00000155420' => array(
'start' => '26652180',
'end' => '26655528',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-002'
),
'ENSDART00000155627' => array(
'start' => '26652576',
'end' => '26653283',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-008'
),
'ENSDART00000155944' => array(
'start' => '26652408',
'end' => '26655523',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-010'
),
'ENSDART00000156217' => array(
'start' => '26652838',
'end' => '26654737',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-009'
),
'ENSDART00000156379' => array(
'start' => '26652176',
'end' => '26654789',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-006'
),
'ENSDART00000024207' => array(
'start' => '57913901',
'end' => '57923009',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx2a-001'
),
'ENSDART00000154265' => array(
'start' => '57883917',
'end' => '57917387',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-199d18.3-001'
),
'ENSDART00000155869' => array(
'start' => '57899917',
'end' => '57915982',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-199d18.3-002'
)
)
$accession_map = array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
)
$sci_name_map = array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
'CIL_0007JV_0001' => array(
'genes_in_region' => array(
'ENSG00000108506' => array(
[maximum depth reached]
),
'ENSG00000108510' => array(
[maximum depth reached]
),
'ENSG00000121068' => array(
[maximum depth reached]
),
'ENSG00000121075' => array(
[maximum depth reached]
),
'ENSG00000136492' => array(
[maximum depth reached]
),
'ENSG00000141376' => array(
[maximum depth reached]
),
'ENSG00000187013' => array(
[maximum depth reached]
),
'ENSG00000202361' => array(
[maximum depth reached]
),
'ENSG00000253506' => array(
[maximum depth reached]
),
'ENSG00000266934' => array(
[maximum depth reached]
),
'ENSG00000267137' => array(
[maximum depth reached]
),
'ENSG00000267280' => array(
[maximum depth reached]
),
'ENSG00000267667' => array(
[maximum depth reached]
),
'ENSG00000273982' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Breast',
(int) 1 => 'Colon',
(int) 2 => 'Lung',
(int) 3 => 'Muscle',
(int) 4 => 'Testis',
(int) 5 => 'Lung',
(int) 6 => 'Testis',
(int) 7 => 'Adipose',
(int) 8 => 'Adrenal',
(int) 9 => 'Bladder',
(int) 10 => 'Brain',
(int) 11 => 'Breast',
(int) 12 => 'Colon',
(int) 13 => 'Heart',
(int) 14 => 'Kidney',
(int) 15 => 'Liver',
(int) 16 => 'Lung',
(int) 17 => 'Muscle',
(int) 18 => 'Ovary',
(int) 19 => 'Placenta',
(int) 20 => 'Testis',
(int) 21 => 'Adipose',
(int) 22 => 'Adrenal',
(int) 23 => 'Bladder',
(int) 24 => 'Brain',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Heart',
(int) 28 => 'Kidney',
(int) 29 => 'Liver',
(int) 30 => 'Lung',
(int) 31 => 'Muscle',
(int) 32 => 'Ovary',
(int) 33 => 'Placenta',
(int) 34 => 'Testis',
(int) 35 => 'Adipose',
(int) 36 => 'Adrenal',
(int) 37 => 'Bladder',
(int) 38 => 'Brain',
(int) 39 => 'Breast',
(int) 40 => 'Colon',
(int) 41 => 'Heart',
(int) 42 => 'Kidney',
(int) 43 => 'Liver',
(int) 44 => 'Lung',
(int) 45 => 'Muscle',
(int) 46 => 'Ovary',
(int) 47 => 'Placenta',
(int) 48 => 'Testis',
(int) 49 => 'Adipose',
(int) 50 => 'Adrenal',
(int) 51 => 'Colon',
(int) 52 => 'Kidney',
(int) 53 => 'Liver',
(int) 54 => 'Ovary',
(int) 55 => 'Placenta',
(int) 56 => 'Testis',
(int) 57 => 'Adrenal',
(int) 58 => 'Bladder',
(int) 59 => 'Brain',
(int) 60 => 'Breast',
(int) 61 => 'Colon',
(int) 62 => 'Heart',
(int) 63 => 'Kidney',
(int) 64 => 'Liver',
(int) 65 => 'Lung',
(int) 66 => 'Ovary',
(int) 67 => 'Testis',
(int) 68 => 'Adipose',
(int) 69 => 'Adrenal',
(int) 70 => 'Brain',
(int) 71 => 'Breast',
(int) 72 => 'Colon',
(int) 73 => 'Kidney',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Placenta',
(int) 77 => 'Testis',
(int) 78 => 'Adipose',
(int) 79 => 'Heart',
(int) 80 => 'Lung',
(int) 81 => 'Muscle',
(int) 82 => 'Ovary',
(int) 83 => 'Placenta',
(int) 84 => 'Testis',
(int) 85 => 'Adipose',
(int) 86 => 'Breast',
(int) 87 => 'Heart',
(int) 88 => 'Liver',
(int) 89 => 'Adrenal',
(int) 90 => 'Colon',
(int) 91 => 'Kidney',
(int) 92 => 'Liver',
(int) 93 => 'Adipose',
(int) 94 => 'Lung',
(int) 95 => 'Ovary',
(int) 96 => 'Adipose',
(int) 97 => 'Adrenal',
(int) 98 => 'Bladder',
(int) 99 => 'Brain',
(int) 100 => 'Breast',
(int) 101 => 'Colon',
(int) 102 => 'Heart',
(int) 103 => 'Kidney',
(int) 104 => 'Liver',
(int) 105 => 'Lung',
(int) 106 => 'Muscle',
(int) 107 => 'Ovary',
(int) 108 => 'Placenta',
(int) 109 => 'Testis',
(int) 110 => 'Brain',
(int) 111 => 'Colon',
(int) 112 => 'Liver',
(int) 113 => 'Lung',
(int) 114 => 'Muscle',
(int) 115 => 'Placenta',
(int) 116 => 'Adipose',
(int) 117 => 'Adrenal',
(int) 118 => 'Breast',
(int) 119 => 'Lung',
(int) 120 => 'Muscle',
(int) 121 => 'Adipose',
(int) 122 => 'Adrenal',
(int) 123 => 'Brain',
(int) 124 => 'Heart',
(int) 125 => 'Muscle',
(int) 126 => 'Placenta',
(int) 127 => 'Testis',
(int) 128 => 'Adipose',
(int) 129 => 'Brain',
(int) 130 => 'Colon',
(int) 131 => 'Heart',
(int) 132 => 'Kidney',
(int) 133 => 'Liver',
(int) 134 => 'Ovary',
(int) 135 => 'Placenta',
(int) 136 => 'Testis',
(int) 137 => 'Ovary',
(int) 138 => 'Placenta',
(int) 139 => 'Breast',
(int) 140 => 'Muscle',
(int) 141 => 'Ovary',
(int) 142 => 'Placenta',
(int) 143 => 'Testis',
(int) 144 => 'Ovary',
(int) 145 => 'Lung',
(int) 146 => 'Ovary',
(int) 147 => 'Breast',
(int) 148 => 'Adipose',
(int) 149 => 'Adrenal',
(int) 150 => 'Bladder',
(int) 151 => 'Adrenal',
(int) 152 => 'Bladder',
(int) 153 => 'Brain',
(int) 154 => 'Breast',
(int) 155 => 'Colon',
(int) 156 => 'Heart',
(int) 157 => 'Kidney',
(int) 158 => 'Liver',
(int) 159 => 'Lung',
(int) 160 => 'Muscle',
(int) 161 => 'Ovary',
(int) 162 => 'Placenta',
(int) 163 => 'Testis',
(int) 164 => 'Colon',
(int) 165 => 'Heart',
(int) 166 => 'Liver',
(int) 167 => 'Testis',
(int) 168 => 'Ovary',
(int) 169 => 'Muscle',
(int) 170 => 'Bladder',
(int) 171 => 'Brain',
(int) 172 => 'Breast',
(int) 173 => 'Colon',
(int) 174 => 'Heart',
(int) 175 => 'Kidney',
(int) 176 => 'Liver',
(int) 177 => 'Lung',
(int) 178 => 'Ovary',
(int) 179 => 'Adipose',
(int) 180 => 'Adrenal',
(int) 181 => 'Brain',
(int) 182 => 'Breast',
(int) 183 => 'Colon',
(int) 184 => 'Heart',
(int) 185 => 'Kidney',
(int) 186 => 'Liver',
(int) 187 => 'Lung',
(int) 188 => 'Muscle',
(int) 189 => 'Ovary',
(int) 190 => 'Placenta',
(int) 191 => 'Testis',
(int) 192 => 'Testis',
(int) 193 => 'Adipose',
(int) 194 => 'Adrenal',
(int) 195 => 'Brain',
(int) 196 => 'Breast',
(int) 197 => 'Colon',
(int) 198 => 'Heart',
(int) 199 => 'Kidney',
(int) 200 => 'Liver',
(int) 201 => 'Lung',
(int) 202 => 'Muscle',
(int) 203 => 'Ovary',
(int) 204 => 'Placenta',
(int) 205 => 'Testis',
(int) 206 => 'Adrenal',
(int) 207 => 'Bladder',
(int) 208 => 'Brain',
(int) 209 => 'Heart',
(int) 210 => 'Kidney',
(int) 211 => 'Muscle',
(int) 212 => 'Ovary',
(int) 213 => 'Placenta',
(int) 214 => 'Testis',
(int) 215 => 'Adrenal',
(int) 216 => 'Brain',
(int) 217 => 'Heart',
(int) 218 => 'Kidney',
(int) 219 => 'Lung',
(int) 220 => 'Ovary',
(int) 221 => 'Testis',
(int) 222 => 'Lung',
(int) 223 => 'Testis',
(int) 224 => 'Lung',
(int) 225 => 'Breast',
(int) 226 => 'Liver',
(int) 227 => 'Testis',
(int) 228 => 'Adipose',
(int) 229 => 'Adrenal',
(int) 230 => 'Brain',
(int) 231 => 'Colon',
(int) 232 => 'Heart',
(int) 233 => 'Kidney',
(int) 234 => 'Lung',
(int) 235 => 'Muscle',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta',
(int) 238 => 'Testis',
(int) 239 => 'Adipose',
(int) 240 => 'Adrenal',
(int) 241 => 'Bladder',
(int) 242 => 'Kidney',
(int) 243 => 'Muscle',
(int) 244 => 'Ovary',
(int) 245 => 'Placenta',
(int) 246 => 'Testis',
(int) 247 => 'Breast',
(int) 248 => 'Lung',
(int) 249 => 'Muscle',
(int) 250 => 'Ovary',
(int) 251 => 'Adipose',
(int) 252 => 'Adrenal',
(int) 253 => 'Brain',
(int) 254 => 'Breast',
(int) 255 => 'Colon',
(int) 256 => 'Heart',
(int) 257 => 'Liver',
(int) 258 => 'Lung',
(int) 259 => 'Muscle',
(int) 260 => 'Ovary',
(int) 261 => 'Placenta',
(int) 262 => 'Testis',
(int) 263 => 'Adrenal',
(int) 264 => 'Heart',
(int) 265 => 'Kidney',
(int) 266 => 'Lung',
(int) 267 => 'Ovary'
)
),
'CIL_0007JV_0002' => array(
'genes_in_region' => array(
'ENSMUSG00000000093' => array(
[maximum depth reached]
),
'ENSMUSG00000000094' => array(
[maximum depth reached]
),
'ENSMUSG00000018068' => array(
[maximum depth reached]
),
'ENSMUSG00000034297' => array(
[maximum depth reached]
),
'ENSMUSG00000034329' => array(
[maximum depth reached]
),
'ENSMUSG00000059439' => array(
[maximum depth reached]
),
'ENSMUSG00000069785' => array(
[maximum depth reached]
),
'ENSMUSG00000080823' => array(
[maximum depth reached]
),
'ENSMUSG00000085208' => array(
[maximum depth reached]
),
'ENSMUSG00000085514' => array(
[maximum depth reached]
),
'ENSMUSG00000086199' => array(
[maximum depth reached]
),
'ENSMUSG00000087013' => array(
[maximum depth reached]
),
'ENSMUSG00000089508' => array(
[maximum depth reached]
),
'ENSMUSG00000093278' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Bladder',
(int) 3 => 'Brain',
(int) 4 => 'Breast',
(int) 5 => 'Colon',
(int) 6 => 'Heart',
(int) 7 => 'Kidney',
(int) 8 => 'Liver',
(int) 9 => 'Lung',
(int) 10 => 'Muscle',
(int) 11 => 'Ovary',
(int) 12 => 'Placenta',
(int) 13 => 'Testis',
(int) 14 => 'Adipose',
(int) 15 => 'Bladder',
(int) 16 => 'Breast',
(int) 17 => 'Heart',
(int) 18 => 'Kidney',
(int) 19 => 'Liver',
(int) 20 => 'Lung',
(int) 21 => 'Muscle',
(int) 22 => 'Placenta',
(int) 23 => 'Testis',
(int) 24 => 'Adipose',
(int) 25 => 'Adrenal',
(int) 26 => 'Bladder',
(int) 27 => 'Brain',
(int) 28 => 'Breast',
(int) 29 => 'Colon',
(int) 30 => 'Heart',
(int) 31 => 'Kidney',
(int) 32 => 'Liver',
(int) 33 => 'Muscle',
(int) 34 => 'Ovary',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Bladder',
(int) 38 => 'Brain',
(int) 39 => 'Heart',
(int) 40 => 'Liver',
(int) 41 => 'Lung',
(int) 42 => 'Muscle',
(int) 43 => 'Placenta',
(int) 44 => 'Adipose',
(int) 45 => 'Adrenal',
(int) 46 => 'Bladder',
(int) 47 => 'Brain',
(int) 48 => 'Colon',
(int) 49 => 'Kidney',
(int) 50 => 'Liver',
(int) 51 => 'Ovary',
(int) 52 => 'Placenta',
(int) 53 => 'Testis',
(int) 54 => 'Adipose',
(int) 55 => 'Adrenal',
(int) 56 => 'Brain',
(int) 57 => 'Colon',
(int) 58 => 'Ovary',
(int) 59 => 'Placenta',
(int) 60 => 'Testis',
(int) 61 => 'Adipose',
(int) 62 => 'Adrenal',
(int) 63 => 'Bladder',
(int) 64 => 'Brain',
(int) 65 => 'Breast',
(int) 66 => 'Colon',
(int) 67 => 'Heart',
(int) 68 => 'Kidney',
(int) 69 => 'Liver',
(int) 70 => 'Lung',
(int) 71 => 'Muscle',
(int) 72 => 'Ovary',
(int) 73 => 'Placenta',
(int) 74 => 'Testis',
(int) 75 => 'Adipose',
(int) 76 => 'Adrenal',
(int) 77 => 'Bladder',
(int) 78 => 'Brain',
(int) 79 => 'Breast',
(int) 80 => 'Colon',
(int) 81 => 'Heart',
(int) 82 => 'Kidney',
(int) 83 => 'Liver',
(int) 84 => 'Lung',
(int) 85 => 'Muscle',
(int) 86 => 'Ovary',
(int) 87 => 'Placenta',
(int) 88 => 'Testis',
(int) 89 => 'Breast',
(int) 90 => 'Colon',
(int) 91 => 'Ovary',
(int) 92 => 'Colon',
(int) 93 => 'Muscle',
(int) 94 => 'Brain',
(int) 95 => 'Brain',
(int) 96 => 'Breast',
(int) 97 => 'Liver',
(int) 98 => 'Ovary',
(int) 99 => 'Placenta',
(int) 100 => 'Testis',
(int) 101 => 'Muscle',
(int) 102 => 'Ovary',
(int) 103 => 'Colon',
(int) 104 => 'Heart',
(int) 105 => 'Muscle',
(int) 106 => 'Testis',
(int) 107 => 'Adipose',
(int) 108 => 'Adrenal',
(int) 109 => 'Bladder',
(int) 110 => 'Brain',
(int) 111 => 'Breast',
(int) 112 => 'Colon',
(int) 113 => 'Heart',
(int) 114 => 'Kidney',
(int) 115 => 'Liver',
(int) 116 => 'Lung',
(int) 117 => 'Muscle',
(int) 118 => 'Ovary',
(int) 119 => 'Placenta',
(int) 120 => 'Testis',
(int) 121 => 'Bladder',
(int) 122 => 'Placenta',
(int) 123 => 'Adrenal',
(int) 124 => 'Ovary',
(int) 125 => 'Placenta',
(int) 126 => 'Adipose',
(int) 127 => 'Adrenal',
(int) 128 => 'Bladder',
(int) 129 => 'Brain',
(int) 130 => 'Breast',
(int) 131 => 'Colon',
(int) 132 => 'Heart',
(int) 133 => 'Kidney',
(int) 134 => 'Liver',
(int) 135 => 'Lung',
(int) 136 => 'Muscle',
(int) 137 => 'Ovary',
(int) 138 => 'Placenta',
(int) 139 => 'Testis',
(int) 140 => 'Adrenal',
(int) 141 => 'Brain',
(int) 142 => 'Breast',
(int) 143 => 'Kidney',
(int) 144 => 'Lung',
(int) 145 => 'Ovary',
(int) 146 => 'Testis',
(int) 147 => 'Adipose',
(int) 148 => 'Bladder',
(int) 149 => 'Brain',
(int) 150 => 'Breast',
(int) 151 => 'Heart',
(int) 152 => 'Kidney',
(int) 153 => 'Liver',
(int) 154 => 'Muscle',
(int) 155 => 'Ovary',
(int) 156 => 'Placenta',
(int) 157 => 'Adipose',
(int) 158 => 'Adrenal',
(int) 159 => 'Bladder',
(int) 160 => 'Brain',
(int) 161 => 'Breast',
(int) 162 => 'Colon',
(int) 163 => 'Heart',
(int) 164 => 'Kidney',
(int) 165 => 'Liver',
(int) 166 => 'Lung',
(int) 167 => 'Ovary',
(int) 168 => 'Placenta',
(int) 169 => 'Adipose',
(int) 170 => 'Adrenal',
(int) 171 => 'Bladder',
(int) 172 => 'Brain',
(int) 173 => 'Breast',
(int) 174 => 'Colon',
(int) 175 => 'Heart',
(int) 176 => 'Kidney',
(int) 177 => 'Liver',
(int) 178 => 'Lung',
(int) 179 => 'Ovary',
(int) 180 => 'Placenta',
(int) 181 => 'Testis',
(int) 182 => 'Brain',
(int) 183 => 'Heart',
(int) 184 => 'Kidney',
(int) 185 => 'Liver',
(int) 186 => 'Lung',
(int) 187 => 'Muscle',
(int) 188 => 'Ovary',
(int) 189 => 'Placenta',
(int) 190 => 'Testis',
(int) 191 => 'Adipose',
(int) 192 => 'Adrenal',
(int) 193 => 'Brain',
(int) 194 => 'Breast',
(int) 195 => 'Colon',
(int) 196 => 'Heart',
(int) 197 => 'Kidney',
(int) 198 => 'Liver',
(int) 199 => 'Muscle',
(int) 200 => 'Ovary',
(int) 201 => 'Placenta',
(int) 202 => 'Testis',
(int) 203 => 'Liver',
(int) 204 => 'Bladder',
(int) 205 => 'Lung',
(int) 206 => 'Bladder',
(int) 207 => 'Ovary',
(int) 208 => 'Testis',
(int) 209 => 'Heart'
)
),
'CIL_0007JV_0004' => array(
'genes_in_region' => array(
'ENSDARG00000006120' => array(
[maximum depth reached]
),
'ENSDARG00000030058' => array(
[maximum depth reached]
),
'ENSDARG00000074410' => array(
[maximum depth reached]
),
'ENSDARG00000086181' => array(
[maximum depth reached]
),
'ENSDARG00000090764' => array(
[maximum depth reached]
),
'ENSDARG00000096918' => array(
[maximum depth reached]
),
'ENSDARG00000097072' => array(
[maximum depth reached]
),
'ENSDARG00000097266' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Brain',
(int) 4 => 'Heart',
(int) 5 => 'Liver',
(int) 6 => 'Brain',
(int) 7 => 'Heart',
(int) 8 => 'Kidney',
(int) 9 => 'Brain',
(int) 10 => 'Kidney',
(int) 11 => 'Brain',
(int) 12 => 'Heart',
(int) 13 => 'Kidney',
(int) 14 => 'Brain',
(int) 15 => 'Heart',
(int) 16 => 'Kidney',
(int) 17 => 'Muscle',
(int) 18 => 'Brain',
(int) 19 => 'Heart',
(int) 20 => 'Kidney',
(int) 21 => 'Liver',
(int) 22 => 'Muscle',
(int) 23 => 'Brain',
(int) 24 => 'Heart',
(int) 25 => 'Kidney',
(int) 26 => 'Muscle',
(int) 27 => 'Brain',
(int) 28 => 'Heart',
(int) 29 => 'Kidney',
(int) 30 => 'Liver',
(int) 31 => 'Muscle',
(int) 32 => 'Brain',
(int) 33 => 'Brain',
(int) 34 => 'Heart',
(int) 35 => 'Kidney',
(int) 36 => 'Liver',
(int) 37 => 'Muscle',
(int) 38 => 'Brain',
(int) 39 => 'Heart',
(int) 40 => 'Kidney',
(int) 41 => 'Liver',
(int) 42 => 'Brain',
(int) 43 => 'Muscle',
(int) 44 => 'Heart',
(int) 45 => 'Brain',
(int) 46 => 'Heart',
(int) 47 => 'Kidney',
(int) 48 => 'Muscle',
(int) 49 => 'Brain',
(int) 50 => 'Heart',
(int) 51 => 'Kidney',
(int) 52 => 'Brain',
(int) 53 => 'Kidney',
(int) 54 => 'Brain',
(int) 55 => 'Brain',
(int) 56 => 'Heart',
(int) 57 => 'Brain'
)
),
'CIL_0007JV_0005' => array(
'genes_in_region' => array(
'ENSDARG00000018025' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Liver',
(int) 4 => 'Muscle',
(int) 5 => 'Kidney'
)
)
)
$accession = array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0003',
'tax_id' => '7955',
'chromosome' => '10',
'seq_start' => '28712083',
'seq_end' => '28712350',
'region_length' => '267',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
)
$gene_el = array(
'ENSMUST00000175537' => array(
'Heart' => array(
'average_FPKM' => '24734.801',
'stddev_FPKM' => '0.00'
)
)
)
$gene_key = 'ENSMUSG00000093278'
$is_first = false
$tran_el = array(
'Heart' => array(
'average_FPKM' => '24734.801',
'stddev_FPKM' => '0.00'
)
)
$tran_key = 'ENSMUST00000175537'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108
Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]Code Context
<tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
<?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
'region_arr' => array(
'CIL_0007JV_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0002' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0004' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0005' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
),
'gene_desc_arr' => array(
'ENSG00000108506' => 'integrator complex subunit 2',
'ENSG00000108510' => 'mediator complex subunit 13',
'ENSG00000121068' => 'T-box 2',
'ENSG00000121075' => 'T-box 4',
'ENSG00000136492' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSG00000141376' => 'breast carcinoma amplified sequence 3',
'ENSG00000187013' => 'chromosome 17 open reading frame 82',
'ENSG00000202361' => 'Y RNA',
'ENSG00000253506' => 'nascent polypeptide-associated complex alpha subunit 2',
'ENSG00000266934' => null,
'ENSG00000267131' => null,
'ENSG00000267137' => null,
'ENSG00000267280' => 'TBX2 antisense RNA 1',
'ENSG00000267667' => null,
'ENSG00000273982' => null,
'ENSG00000278751' => null,
'ENSMUSG00000000093' => 'T-box 2',
'ENSMUSG00000000094' => 'T-box 4',
'ENSMUSG00000018068' => 'integrator complex subunit 2',
'ENSMUSG00000034297' => 'mediator complex subunit 13',
'ENSMUSG00000034329' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSMUSG00000059439' => 'breast carcinoma amplified sequence 3',
'ENSMUSG00000069785' => 'predicted gene 11444',
'ENSMUSG00000080823' => 'ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, pseudogene 2',
'ENSMUSG00000081632' => 'predicted gene 11443',
'ENSMUSG00000085208' => 'BRCA1 interacting protein C-terminal helicase 1, opposite strand',
'ENSMUSG00000085514' => 'breast carcinoma amplified sequence 3 opposite strand 2',
'ENSMUSG00000086199' => 'breast carcinoma amplified sequence 3, opposite strand 1',
'ENSMUSG00000087013' => 'RIKEN cDNA 2610027K06 gene',
'ENSMUSG00000089508' => 'predicted gene, 23473',
'ENSMUSG00000093278' => 'microRNA 5110',
'ENSDARG00000006120' => 'T-box 2b',
'ENSDARG00000030058' => 'T-box 4',
'ENSDARG00000074410' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSDARG00000084002' => '5S ribosomal RNA',
'ENSDARG00000086181' => 'Uncharacterized protein',
'ENSDARG00000090764' => 'breast carcinoma amplified sequence 3',
'ENSDARG00000096918' => 'si:ch211-229g11.3',
'ENSDARG00000097072' => 'si:ch211-229g11.6',
'ENSDARG00000097266' => 'si:ch211-229g11.5',
'ENSDARG00000018025' => 'T-box gene 2a',
'ENSDARG00000097120' => 'si:ch211-199d18.3'
),
'gene_name_arr' => array(
'ENSG00000108506' => 'INTS2',
'ENSG00000108510' => 'MED13',
'ENSG00000121068' => 'TBX2',
'ENSG00000121075' => 'TBX4',
'ENSG00000136492' => 'BRIP1',
'ENSG00000141376' => 'BCAS3',
'ENSG00000187013' => 'C17orf82',
'ENSG00000202361' => 'Y_RNA',
'ENSG00000253506' => 'NACA2',
'ENSG00000266934' => 'RP11-332H18.3',
'ENSG00000267131' => 'RP11-332H18.5',
'ENSG00000267137' => 'RP11-15K2.2',
'ENSG00000267280' => 'TBX2-AS1',
'ENSG00000267667' => 'RP11-136H19.1',
'ENSG00000273982' => 'RP11-332H18.7',
'ENSG00000278751' => 'AC005901.1',
'ENSMUSG00000000093' => 'Tbx2',
'ENSMUSG00000000094' => 'Tbx4',
'ENSMUSG00000018068' => 'Ints2',
'ENSMUSG00000034297' => 'Med13',
'ENSMUSG00000034329' => 'Brip1',
'ENSMUSG00000059439' => 'Bcas3',
'ENSMUSG00000069785' => 'Gm11444',
'ENSMUSG00000080823' => 'Atp5l-ps2',
'ENSMUSG00000081632' => 'Gm11443',
'ENSMUSG00000085208' => 'Brip1os',
'ENSMUSG00000085514' => 'Bcas3os2',
'ENSMUSG00000086199' => 'Bcas3os1',
'ENSMUSG00000087013' => '2610027K06Rik',
'ENSMUSG00000089508' => 'Gm23473',
'ENSMUSG00000093278' => 'Mir5110',
'ENSDARG00000006120' => 'tbx2b',
'ENSDARG00000030058' => 'tbx4',
'ENSDARG00000074410' => 'brip1',
'ENSDARG00000084002' => '5S_rRNA',
'ENSDARG00000086181' => 'BX005052.1',
'ENSDARG00000090764' => 'bcas3',
'ENSDARG00000096918' => 'si:ch211-229g11.3',
'ENSDARG00000097072' => 'si:ch211-229g11.6',
'ENSDARG00000097266' => 'si:ch211-229g11.5',
'ENSDARG00000018025' => 'tbx2a',
'ENSDARG00000097120' => 'si:ch211-199d18.3'
),
'accession_table' => array(
(int) 0 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 1 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 2 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 3 => array(
'region_elements' => array(
[maximum depth reached]
)
),
(int) 4 => array(
'region_elements' => array(
[maximum depth reached]
)
)
),
'all_tissues' => array(
(int) 0 => 'Adipose',
(int) 31 => 'Adrenal',
(int) 64 => 'Bladder',
(int) 89 => 'Brain',
(int) 143 => 'Breast',
(int) 175 => 'Colon',
(int) 207 => 'Heart',
(int) 256 => 'Kidney',
(int) 303 => 'Liver',
(int) 342 => 'Lung',
(int) 378 => 'Muscle',
(int) 419 => 'Ovary',
(int) 464 => 'Placenta',
(int) 501 => 'Testis'
),
'column_titles' => array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
),
'geneviewer' => array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCh38.2bit',
'bwgURI' => '/static/files/GRCh38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 10090 => array(
'version' => 'GRCm38',
'coord_key' => 'Mus musculus',
'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCm38.2bit',
'bwgURI' => '/static/files/GRCm38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 7955 => array(
'version' => 'Zv9',
'coord_key' => 'Danio rerio',
'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
'twoBitURI' => '/static/files/Zv9.2bit',
'bwgURI' => '/static/files/Zv9.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
)
),
'transcript_count' => (int) 160,
'longest_tissue_len' => (int) 8,
'transcript_data' => array(
'ENST00000251334' => array(
'start' => '61867249',
'end' => '61927991',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-002'
),
'ENST00000444766' => array(
'start' => '61865370',
'end' => '61928016',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-001'
),
'ENST00000578805' => array(
'start' => '61891577',
'end' => '61894186',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-004'
),
'ENST00000583076' => array(
'start' => '61926408',
'end' => '61927426',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-003'
),
'ENST00000583822' => array(
'start' => '61872023',
'end' => '61885005',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-006'
),
'ENST00000584967' => array(
'start' => '61877981',
'end' => '61885290',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-005'
),
'ENST00000617492' => array(
'start' => '61865367',
'end' => '61927105',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-201'
),
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'transcript_name' => 'Atp5l-ps2-001'
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'ENSMUST00000118790' => array(
'start' => '85950495',
'end' => '85950973',
'transcript_biotype' => 'processed_pseudogene',
'transcript_name' => 'Gm11443-001'
),
'ENSMUST00000128960' => array(
'start' => '86201370',
'end' => '86211192',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Brip1os-001'
),
'ENSMUST00000143819' => array(
'start' => '86201383',
'end' => '86304443',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Brip1os-002'
),
'ENSMUST00000134305' => array(
'start' => '85766831',
'end' => '85775680',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Bcas3os2-001'
),
'ENSMUST00000146806' => array(
'start' => '85704143',
'end' => '85719744',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Bcas3os1-001'
),
'ENSMUST00000151652' => array(
'start' => '85702200',
'end' => '85719744',
'transcript_biotype' => 'antisense',
'transcript_name' => 'Bcas3os1-002'
),
'ENSMUST00000128213' => array(
'start' => '85795875',
'end' => '85804155',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => '2610027K06Rik-003'
),
'ENSMUST00000136117' => array(
'start' => '85795789',
'end' => '85832223',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => '2610027K06Rik-001'
),
'ENSMUST00000140673' => array(
'start' => '85791661',
'end' => '85832209',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => '2610027K06Rik-002'
),
'ENSMUST00000158883' => array(
'start' => '85778812',
'end' => '85778927',
'transcript_biotype' => 'rRNA',
'transcript_name' => 'Gm23473-201'
),
'ENSMUST00000175537' => array(
'start' => '85760616',
'end' => '85760702',
'transcript_biotype' => 'miRNA',
'transcript_name' => 'Mir5110-201'
),
'ENSDART00000005491' => array(
'start' => '26713725',
'end' => '26720073',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx2b-201'
),
'ENSDART00000122101' => array(
'start' => '26713282',
'end' => '26720228',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx2b-001'
),
'ENSDART00000018603' => array(
'start' => '26736443',
'end' => '26760093',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx4-001'
),
'ENSDART00000109262' => array(
'start' => '26801204',
'end' => '26871645',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'brip1-201'
),
'ENSDART00000112643' => array(
'start' => '26801206',
'end' => '26871275',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'brip1-001'
),
'ENSDART00000149374' => array(
'start' => '26863368',
'end' => '26871694',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'brip1-003'
),
'ENSDART00000119402' => array(
'start' => '26824146',
'end' => '26824262',
'transcript_biotype' => 'rRNA',
'transcript_name' => '5S_rRNA.463-201'
),
'ENSDART00000126452' => array(
'start' => '26516494',
'end' => '26522053',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BX005052.1-201'
),
'ENSDART00000077172' => array(
'start' => '26277623',
'end' => '26425706',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'bcas3-201'
),
'ENSDART00000079294' => array(
'start' => '26676983',
'end' => '26703644',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'bcas3-202'
),
'ENSDART00000149957' => array(
'start' => '26276820',
'end' => '26703647',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'bcas3-001'
),
'ENSDART00000157224' => array(
'start' => '26645564',
'end' => '26649721',
'transcript_biotype' => 'sense_intronic',
'transcript_name' => 'si:ch211-229g11.3-001'
),
'ENSDART00000155403' => array(
'start' => '26705713',
'end' => '26712956',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'si:ch211-229g11.6-001'
),
'ENSDART00000155933' => array(
'start' => '26706247',
'end' => '26713025',
'transcript_biotype' => 'lincRNA',
'transcript_name' => 'si:ch211-229g11.6-002'
),
'ENSDART00000153528' => array(
'start' => '26652718',
'end' => '26654988',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-004'
),
'ENSDART00000153757' => array(
'start' => '26652167',
'end' => '26654900',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-001'
),
'ENSDART00000154027' => array(
'start' => '26653015',
'end' => '26653558',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-007'
),
'ENSDART00000154128' => array(
'start' => '26652348',
'end' => '26654804',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-005'
),
'ENSDART00000154706' => array(
'start' => '26653931',
'end' => '26655523',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-003'
),
'ENSDART00000154800' => array(
'start' => '26652672',
'end' => '26655976',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-011'
),
'ENSDART00000155420' => array(
'start' => '26652180',
'end' => '26655528',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-002'
),
'ENSDART00000155627' => array(
'start' => '26652576',
'end' => '26653283',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-008'
),
'ENSDART00000155944' => array(
'start' => '26652408',
'end' => '26655523',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-010'
),
'ENSDART00000156217' => array(
'start' => '26652838',
'end' => '26654737',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-009'
),
'ENSDART00000156379' => array(
'start' => '26652176',
'end' => '26654789',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-006'
),
'ENSDART00000024207' => array(
'start' => '57913901',
'end' => '57923009',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx2a-001'
),
'ENSDART00000154265' => array(
'start' => '57883917',
'end' => '57917387',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-199d18.3-001'
),
'ENSDART00000155869' => array(
'start' => '57899917',
'end' => '57915982',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-199d18.3-002'
)
),
'accession_map' => array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
),
'sci_name_map' => array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
),
'UCSC_links' => array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
),
'expressed_region_arr' => array(
'CIL_0007JV_0001' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0002' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0004' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
),
'CIL_0007JV_0005' => array(
'genes_in_region' => array(
[maximum depth reached]
),
'tissues_title' => array(
[maximum depth reached]
)
)
)
)
$region_arr = array(
'CIL_0007JV_0001' => array(
'genes_in_region' => array(
'ENSG00000108506' => array(
[maximum depth reached]
),
'ENSG00000108510' => array(
[maximum depth reached]
),
'ENSG00000121068' => array(
[maximum depth reached]
),
'ENSG00000121075' => array(
[maximum depth reached]
),
'ENSG00000136492' => array(
[maximum depth reached]
),
'ENSG00000141376' => array(
[maximum depth reached]
),
'ENSG00000187013' => array(
[maximum depth reached]
),
'ENSG00000202361' => array(
[maximum depth reached]
),
'ENSG00000253506' => array(
[maximum depth reached]
),
'ENSG00000266934' => array(
[maximum depth reached]
),
'ENSG00000267137' => array(
[maximum depth reached]
),
'ENSG00000267280' => array(
[maximum depth reached]
),
'ENSG00000267667' => array(
[maximum depth reached]
),
'ENSG00000273982' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Breast',
(int) 1 => 'Colon',
(int) 2 => 'Lung',
(int) 3 => 'Muscle',
(int) 4 => 'Testis',
(int) 5 => 'Lung',
(int) 6 => 'Testis',
(int) 7 => 'Adipose',
(int) 8 => 'Adrenal',
(int) 9 => 'Bladder',
(int) 10 => 'Brain',
(int) 11 => 'Breast',
(int) 12 => 'Colon',
(int) 13 => 'Heart',
(int) 14 => 'Kidney',
(int) 15 => 'Liver',
(int) 16 => 'Lung',
(int) 17 => 'Muscle',
(int) 18 => 'Ovary',
(int) 19 => 'Placenta',
(int) 20 => 'Testis',
(int) 21 => 'Adipose',
(int) 22 => 'Adrenal',
(int) 23 => 'Bladder',
(int) 24 => 'Brain',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Heart',
(int) 28 => 'Kidney',
(int) 29 => 'Liver',
(int) 30 => 'Lung',
(int) 31 => 'Muscle',
(int) 32 => 'Ovary',
(int) 33 => 'Placenta',
(int) 34 => 'Testis',
(int) 35 => 'Adipose',
(int) 36 => 'Adrenal',
(int) 37 => 'Bladder',
(int) 38 => 'Brain',
(int) 39 => 'Breast',
(int) 40 => 'Colon',
(int) 41 => 'Heart',
(int) 42 => 'Kidney',
(int) 43 => 'Liver',
(int) 44 => 'Lung',
(int) 45 => 'Muscle',
(int) 46 => 'Ovary',
(int) 47 => 'Placenta',
(int) 48 => 'Testis',
(int) 49 => 'Adipose',
(int) 50 => 'Adrenal',
(int) 51 => 'Colon',
(int) 52 => 'Kidney',
(int) 53 => 'Liver',
(int) 54 => 'Ovary',
(int) 55 => 'Placenta',
(int) 56 => 'Testis',
(int) 57 => 'Adrenal',
(int) 58 => 'Bladder',
(int) 59 => 'Brain',
(int) 60 => 'Breast',
(int) 61 => 'Colon',
(int) 62 => 'Heart',
(int) 63 => 'Kidney',
(int) 64 => 'Liver',
(int) 65 => 'Lung',
(int) 66 => 'Ovary',
(int) 67 => 'Testis',
(int) 68 => 'Adipose',
(int) 69 => 'Adrenal',
(int) 70 => 'Brain',
(int) 71 => 'Breast',
(int) 72 => 'Colon',
(int) 73 => 'Kidney',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Placenta',
(int) 77 => 'Testis',
(int) 78 => 'Adipose',
(int) 79 => 'Heart',
(int) 80 => 'Lung',
(int) 81 => 'Muscle',
(int) 82 => 'Ovary',
(int) 83 => 'Placenta',
(int) 84 => 'Testis',
(int) 85 => 'Adipose',
(int) 86 => 'Breast',
(int) 87 => 'Heart',
(int) 88 => 'Liver',
(int) 89 => 'Adrenal',
(int) 90 => 'Colon',
(int) 91 => 'Kidney',
(int) 92 => 'Liver',
(int) 93 => 'Adipose',
(int) 94 => 'Lung',
(int) 95 => 'Ovary',
(int) 96 => 'Adipose',
(int) 97 => 'Adrenal',
(int) 98 => 'Bladder',
(int) 99 => 'Brain',
(int) 100 => 'Breast',
(int) 101 => 'Colon',
(int) 102 => 'Heart',
(int) 103 => 'Kidney',
(int) 104 => 'Liver',
(int) 105 => 'Lung',
(int) 106 => 'Muscle',
(int) 107 => 'Ovary',
(int) 108 => 'Placenta',
(int) 109 => 'Testis',
(int) 110 => 'Brain',
(int) 111 => 'Colon',
(int) 112 => 'Liver',
(int) 113 => 'Lung',
(int) 114 => 'Muscle',
(int) 115 => 'Placenta',
(int) 116 => 'Adipose',
(int) 117 => 'Adrenal',
(int) 118 => 'Breast',
(int) 119 => 'Lung',
(int) 120 => 'Muscle',
(int) 121 => 'Adipose',
(int) 122 => 'Adrenal',
(int) 123 => 'Brain',
(int) 124 => 'Heart',
(int) 125 => 'Muscle',
(int) 126 => 'Placenta',
(int) 127 => 'Testis',
(int) 128 => 'Adipose',
(int) 129 => 'Brain',
(int) 130 => 'Colon',
(int) 131 => 'Heart',
(int) 132 => 'Kidney',
(int) 133 => 'Liver',
(int) 134 => 'Ovary',
(int) 135 => 'Placenta',
(int) 136 => 'Testis',
(int) 137 => 'Ovary',
(int) 138 => 'Placenta',
(int) 139 => 'Breast',
(int) 140 => 'Muscle',
(int) 141 => 'Ovary',
(int) 142 => 'Placenta',
(int) 143 => 'Testis',
(int) 144 => 'Ovary',
(int) 145 => 'Lung',
(int) 146 => 'Ovary',
(int) 147 => 'Breast',
(int) 148 => 'Adipose',
(int) 149 => 'Adrenal',
(int) 150 => 'Bladder',
(int) 151 => 'Adrenal',
(int) 152 => 'Bladder',
(int) 153 => 'Brain',
(int) 154 => 'Breast',
(int) 155 => 'Colon',
(int) 156 => 'Heart',
(int) 157 => 'Kidney',
(int) 158 => 'Liver',
(int) 159 => 'Lung',
(int) 160 => 'Muscle',
(int) 161 => 'Ovary',
(int) 162 => 'Placenta',
(int) 163 => 'Testis',
(int) 164 => 'Colon',
(int) 165 => 'Heart',
(int) 166 => 'Liver',
(int) 167 => 'Testis',
(int) 168 => 'Ovary',
(int) 169 => 'Muscle',
(int) 170 => 'Bladder',
(int) 171 => 'Brain',
(int) 172 => 'Breast',
(int) 173 => 'Colon',
(int) 174 => 'Heart',
(int) 175 => 'Kidney',
(int) 176 => 'Liver',
(int) 177 => 'Lung',
(int) 178 => 'Ovary',
(int) 179 => 'Adipose',
(int) 180 => 'Adrenal',
(int) 181 => 'Brain',
(int) 182 => 'Breast',
(int) 183 => 'Colon',
(int) 184 => 'Heart',
(int) 185 => 'Kidney',
(int) 186 => 'Liver',
(int) 187 => 'Lung',
(int) 188 => 'Muscle',
(int) 189 => 'Ovary',
(int) 190 => 'Placenta',
(int) 191 => 'Testis',
(int) 192 => 'Testis',
(int) 193 => 'Adipose',
(int) 194 => 'Adrenal',
(int) 195 => 'Brain',
(int) 196 => 'Breast',
(int) 197 => 'Colon',
(int) 198 => 'Heart',
(int) 199 => 'Kidney',
(int) 200 => 'Liver',
(int) 201 => 'Lung',
(int) 202 => 'Muscle',
(int) 203 => 'Ovary',
(int) 204 => 'Placenta',
(int) 205 => 'Testis',
(int) 206 => 'Adrenal',
(int) 207 => 'Bladder',
(int) 208 => 'Brain',
(int) 209 => 'Heart',
(int) 210 => 'Kidney',
(int) 211 => 'Muscle',
(int) 212 => 'Ovary',
(int) 213 => 'Placenta',
(int) 214 => 'Testis',
(int) 215 => 'Adrenal',
(int) 216 => 'Brain',
(int) 217 => 'Heart',
(int) 218 => 'Kidney',
(int) 219 => 'Lung',
(int) 220 => 'Ovary',
(int) 221 => 'Testis',
(int) 222 => 'Lung',
(int) 223 => 'Testis',
(int) 224 => 'Lung',
(int) 225 => 'Breast',
(int) 226 => 'Liver',
(int) 227 => 'Testis',
(int) 228 => 'Adipose',
(int) 229 => 'Adrenal',
(int) 230 => 'Brain',
(int) 231 => 'Colon',
(int) 232 => 'Heart',
(int) 233 => 'Kidney',
(int) 234 => 'Lung',
(int) 235 => 'Muscle',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta',
(int) 238 => 'Testis',
(int) 239 => 'Adipose',
(int) 240 => 'Adrenal',
(int) 241 => 'Bladder',
(int) 242 => 'Kidney',
(int) 243 => 'Muscle',
(int) 244 => 'Ovary',
(int) 245 => 'Placenta',
(int) 246 => 'Testis',
(int) 247 => 'Breast',
(int) 248 => 'Lung',
(int) 249 => 'Muscle',
(int) 250 => 'Ovary',
(int) 251 => 'Adipose',
(int) 252 => 'Adrenal',
(int) 253 => 'Brain',
(int) 254 => 'Breast',
(int) 255 => 'Colon',
(int) 256 => 'Heart',
(int) 257 => 'Liver',
(int) 258 => 'Lung',
(int) 259 => 'Muscle',
(int) 260 => 'Ovary',
(int) 261 => 'Placenta',
(int) 262 => 'Testis',
(int) 263 => 'Adrenal',
(int) 264 => 'Heart',
(int) 265 => 'Kidney',
(int) 266 => 'Lung',
(int) 267 => 'Ovary'
)
),
'CIL_0007JV_0002' => array(
'genes_in_region' => array(
'ENSMUSG00000000093' => array(
[maximum depth reached]
),
'ENSMUSG00000000094' => array(
[maximum depth reached]
),
'ENSMUSG00000018068' => array(
[maximum depth reached]
),
'ENSMUSG00000034297' => array(
[maximum depth reached]
),
'ENSMUSG00000034329' => array(
[maximum depth reached]
),
'ENSMUSG00000059439' => array(
[maximum depth reached]
),
'ENSMUSG00000069785' => array(
[maximum depth reached]
),
'ENSMUSG00000080823' => array(
[maximum depth reached]
),
'ENSMUSG00000085208' => array(
[maximum depth reached]
),
'ENSMUSG00000085514' => array(
[maximum depth reached]
),
'ENSMUSG00000086199' => array(
[maximum depth reached]
),
'ENSMUSG00000087013' => array(
[maximum depth reached]
),
'ENSMUSG00000089508' => array(
[maximum depth reached]
),
'ENSMUSG00000093278' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Bladder',
(int) 3 => 'Brain',
(int) 4 => 'Breast',
(int) 5 => 'Colon',
(int) 6 => 'Heart',
(int) 7 => 'Kidney',
(int) 8 => 'Liver',
(int) 9 => 'Lung',
(int) 10 => 'Muscle',
(int) 11 => 'Ovary',
(int) 12 => 'Placenta',
(int) 13 => 'Testis',
(int) 14 => 'Adipose',
(int) 15 => 'Bladder',
(int) 16 => 'Breast',
(int) 17 => 'Heart',
(int) 18 => 'Kidney',
(int) 19 => 'Liver',
(int) 20 => 'Lung',
(int) 21 => 'Muscle',
(int) 22 => 'Placenta',
(int) 23 => 'Testis',
(int) 24 => 'Adipose',
(int) 25 => 'Adrenal',
(int) 26 => 'Bladder',
(int) 27 => 'Brain',
(int) 28 => 'Breast',
(int) 29 => 'Colon',
(int) 30 => 'Heart',
(int) 31 => 'Kidney',
(int) 32 => 'Liver',
(int) 33 => 'Muscle',
(int) 34 => 'Ovary',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Bladder',
(int) 38 => 'Brain',
(int) 39 => 'Heart',
(int) 40 => 'Liver',
(int) 41 => 'Lung',
(int) 42 => 'Muscle',
(int) 43 => 'Placenta',
(int) 44 => 'Adipose',
(int) 45 => 'Adrenal',
(int) 46 => 'Bladder',
(int) 47 => 'Brain',
(int) 48 => 'Colon',
(int) 49 => 'Kidney',
(int) 50 => 'Liver',
(int) 51 => 'Ovary',
(int) 52 => 'Placenta',
(int) 53 => 'Testis',
(int) 54 => 'Adipose',
(int) 55 => 'Adrenal',
(int) 56 => 'Brain',
(int) 57 => 'Colon',
(int) 58 => 'Ovary',
(int) 59 => 'Placenta',
(int) 60 => 'Testis',
(int) 61 => 'Adipose',
(int) 62 => 'Adrenal',
(int) 63 => 'Bladder',
(int) 64 => 'Brain',
(int) 65 => 'Breast',
(int) 66 => 'Colon',
(int) 67 => 'Heart',
(int) 68 => 'Kidney',
(int) 69 => 'Liver',
(int) 70 => 'Lung',
(int) 71 => 'Muscle',
(int) 72 => 'Ovary',
(int) 73 => 'Placenta',
(int) 74 => 'Testis',
(int) 75 => 'Adipose',
(int) 76 => 'Adrenal',
(int) 77 => 'Bladder',
(int) 78 => 'Brain',
(int) 79 => 'Breast',
(int) 80 => 'Colon',
(int) 81 => 'Heart',
(int) 82 => 'Kidney',
(int) 83 => 'Liver',
(int) 84 => 'Lung',
(int) 85 => 'Muscle',
(int) 86 => 'Ovary',
(int) 87 => 'Placenta',
(int) 88 => 'Testis',
(int) 89 => 'Breast',
(int) 90 => 'Colon',
(int) 91 => 'Ovary',
(int) 92 => 'Colon',
(int) 93 => 'Muscle',
(int) 94 => 'Brain',
(int) 95 => 'Brain',
(int) 96 => 'Breast',
(int) 97 => 'Liver',
(int) 98 => 'Ovary',
(int) 99 => 'Placenta',
(int) 100 => 'Testis',
(int) 101 => 'Muscle',
(int) 102 => 'Ovary',
(int) 103 => 'Colon',
(int) 104 => 'Heart',
(int) 105 => 'Muscle',
(int) 106 => 'Testis',
(int) 107 => 'Adipose',
(int) 108 => 'Adrenal',
(int) 109 => 'Bladder',
(int) 110 => 'Brain',
(int) 111 => 'Breast',
(int) 112 => 'Colon',
(int) 113 => 'Heart',
(int) 114 => 'Kidney',
(int) 115 => 'Liver',
(int) 116 => 'Lung',
(int) 117 => 'Muscle',
(int) 118 => 'Ovary',
(int) 119 => 'Placenta',
(int) 120 => 'Testis',
(int) 121 => 'Bladder',
(int) 122 => 'Placenta',
(int) 123 => 'Adrenal',
(int) 124 => 'Ovary',
(int) 125 => 'Placenta',
(int) 126 => 'Adipose',
(int) 127 => 'Adrenal',
(int) 128 => 'Bladder',
(int) 129 => 'Brain',
(int) 130 => 'Breast',
(int) 131 => 'Colon',
(int) 132 => 'Heart',
(int) 133 => 'Kidney',
(int) 134 => 'Liver',
(int) 135 => 'Lung',
(int) 136 => 'Muscle',
(int) 137 => 'Ovary',
(int) 138 => 'Placenta',
(int) 139 => 'Testis',
(int) 140 => 'Adrenal',
(int) 141 => 'Brain',
(int) 142 => 'Breast',
(int) 143 => 'Kidney',
(int) 144 => 'Lung',
(int) 145 => 'Ovary',
(int) 146 => 'Testis',
(int) 147 => 'Adipose',
(int) 148 => 'Bladder',
(int) 149 => 'Brain',
(int) 150 => 'Breast',
(int) 151 => 'Heart',
(int) 152 => 'Kidney',
(int) 153 => 'Liver',
(int) 154 => 'Muscle',
(int) 155 => 'Ovary',
(int) 156 => 'Placenta',
(int) 157 => 'Adipose',
(int) 158 => 'Adrenal',
(int) 159 => 'Bladder',
(int) 160 => 'Brain',
(int) 161 => 'Breast',
(int) 162 => 'Colon',
(int) 163 => 'Heart',
(int) 164 => 'Kidney',
(int) 165 => 'Liver',
(int) 166 => 'Lung',
(int) 167 => 'Ovary',
(int) 168 => 'Placenta',
(int) 169 => 'Adipose',
(int) 170 => 'Adrenal',
(int) 171 => 'Bladder',
(int) 172 => 'Brain',
(int) 173 => 'Breast',
(int) 174 => 'Colon',
(int) 175 => 'Heart',
(int) 176 => 'Kidney',
(int) 177 => 'Liver',
(int) 178 => 'Lung',
(int) 179 => 'Ovary',
(int) 180 => 'Placenta',
(int) 181 => 'Testis',
(int) 182 => 'Brain',
(int) 183 => 'Heart',
(int) 184 => 'Kidney',
(int) 185 => 'Liver',
(int) 186 => 'Lung',
(int) 187 => 'Muscle',
(int) 188 => 'Ovary',
(int) 189 => 'Placenta',
(int) 190 => 'Testis',
(int) 191 => 'Adipose',
(int) 192 => 'Adrenal',
(int) 193 => 'Brain',
(int) 194 => 'Breast',
(int) 195 => 'Colon',
(int) 196 => 'Heart',
(int) 197 => 'Kidney',
(int) 198 => 'Liver',
(int) 199 => 'Muscle',
(int) 200 => 'Ovary',
(int) 201 => 'Placenta',
(int) 202 => 'Testis',
(int) 203 => 'Liver',
(int) 204 => 'Bladder',
(int) 205 => 'Lung',
(int) 206 => 'Bladder',
(int) 207 => 'Ovary',
(int) 208 => 'Testis',
(int) 209 => 'Heart'
)
),
'CIL_0007JV_0004' => array(
'genes_in_region' => array(
'ENSDARG00000006120' => array(
[maximum depth reached]
),
'ENSDARG00000030058' => array(
[maximum depth reached]
),
'ENSDARG00000074410' => array(
[maximum depth reached]
),
'ENSDARG00000086181' => array(
[maximum depth reached]
),
'ENSDARG00000090764' => array(
[maximum depth reached]
),
'ENSDARG00000096918' => array(
[maximum depth reached]
),
'ENSDARG00000097072' => array(
[maximum depth reached]
),
'ENSDARG00000097266' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Brain',
(int) 4 => 'Heart',
(int) 5 => 'Liver',
(int) 6 => 'Brain',
(int) 7 => 'Heart',
(int) 8 => 'Kidney',
(int) 9 => 'Brain',
(int) 10 => 'Kidney',
(int) 11 => 'Brain',
(int) 12 => 'Heart',
(int) 13 => 'Kidney',
(int) 14 => 'Brain',
(int) 15 => 'Heart',
(int) 16 => 'Kidney',
(int) 17 => 'Muscle',
(int) 18 => 'Brain',
(int) 19 => 'Heart',
(int) 20 => 'Kidney',
(int) 21 => 'Liver',
(int) 22 => 'Muscle',
(int) 23 => 'Brain',
(int) 24 => 'Heart',
(int) 25 => 'Kidney',
(int) 26 => 'Muscle',
(int) 27 => 'Brain',
(int) 28 => 'Heart',
(int) 29 => 'Kidney',
(int) 30 => 'Liver',
(int) 31 => 'Muscle',
(int) 32 => 'Brain',
(int) 33 => 'Brain',
(int) 34 => 'Heart',
(int) 35 => 'Kidney',
(int) 36 => 'Liver',
(int) 37 => 'Muscle',
(int) 38 => 'Brain',
(int) 39 => 'Heart',
(int) 40 => 'Kidney',
(int) 41 => 'Liver',
(int) 42 => 'Brain',
(int) 43 => 'Muscle',
(int) 44 => 'Heart',
(int) 45 => 'Brain',
(int) 46 => 'Heart',
(int) 47 => 'Kidney',
(int) 48 => 'Muscle',
(int) 49 => 'Brain',
(int) 50 => 'Heart',
(int) 51 => 'Kidney',
(int) 52 => 'Brain',
(int) 53 => 'Kidney',
(int) 54 => 'Brain',
(int) 55 => 'Brain',
(int) 56 => 'Heart',
(int) 57 => 'Brain'
)
),
'CIL_0007JV_0005' => array(
'genes_in_region' => array(
'ENSDARG00000018025' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Liver',
(int) 4 => 'Muscle',
(int) 5 => 'Kidney'
)
)
)
$gene_desc_arr = array(
'ENSG00000108506' => 'integrator complex subunit 2',
'ENSG00000108510' => 'mediator complex subunit 13',
'ENSG00000121068' => 'T-box 2',
'ENSG00000121075' => 'T-box 4',
'ENSG00000136492' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSG00000141376' => 'breast carcinoma amplified sequence 3',
'ENSG00000187013' => 'chromosome 17 open reading frame 82',
'ENSG00000202361' => 'Y RNA',
'ENSG00000253506' => 'nascent polypeptide-associated complex alpha subunit 2',
'ENSG00000266934' => null,
'ENSG00000267131' => null,
'ENSG00000267137' => null,
'ENSG00000267280' => 'TBX2 antisense RNA 1',
'ENSG00000267667' => null,
'ENSG00000273982' => null,
'ENSG00000278751' => null,
'ENSMUSG00000000093' => 'T-box 2',
'ENSMUSG00000000094' => 'T-box 4',
'ENSMUSG00000018068' => 'integrator complex subunit 2',
'ENSMUSG00000034297' => 'mediator complex subunit 13',
'ENSMUSG00000034329' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSMUSG00000059439' => 'breast carcinoma amplified sequence 3',
'ENSMUSG00000069785' => 'predicted gene 11444',
'ENSMUSG00000080823' => 'ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, pseudogene 2',
'ENSMUSG00000081632' => 'predicted gene 11443',
'ENSMUSG00000085208' => 'BRCA1 interacting protein C-terminal helicase 1, opposite strand',
'ENSMUSG00000085514' => 'breast carcinoma amplified sequence 3 opposite strand 2',
'ENSMUSG00000086199' => 'breast carcinoma amplified sequence 3, opposite strand 1',
'ENSMUSG00000087013' => 'RIKEN cDNA 2610027K06 gene',
'ENSMUSG00000089508' => 'predicted gene, 23473',
'ENSMUSG00000093278' => 'microRNA 5110',
'ENSDARG00000006120' => 'T-box 2b',
'ENSDARG00000030058' => 'T-box 4',
'ENSDARG00000074410' => 'BRCA1 interacting protein C-terminal helicase 1',
'ENSDARG00000084002' => '5S ribosomal RNA',
'ENSDARG00000086181' => 'Uncharacterized protein',
'ENSDARG00000090764' => 'breast carcinoma amplified sequence 3',
'ENSDARG00000096918' => 'si:ch211-229g11.3',
'ENSDARG00000097072' => 'si:ch211-229g11.6',
'ENSDARG00000097266' => 'si:ch211-229g11.5',
'ENSDARG00000018025' => 'T-box gene 2a',
'ENSDARG00000097120' => 'si:ch211-199d18.3'
)
$gene_name_arr = array(
'ENSG00000108506' => 'INTS2',
'ENSG00000108510' => 'MED13',
'ENSG00000121068' => 'TBX2',
'ENSG00000121075' => 'TBX4',
'ENSG00000136492' => 'BRIP1',
'ENSG00000141376' => 'BCAS3',
'ENSG00000187013' => 'C17orf82',
'ENSG00000202361' => 'Y_RNA',
'ENSG00000253506' => 'NACA2',
'ENSG00000266934' => 'RP11-332H18.3',
'ENSG00000267131' => 'RP11-332H18.5',
'ENSG00000267137' => 'RP11-15K2.2',
'ENSG00000267280' => 'TBX2-AS1',
'ENSG00000267667' => 'RP11-136H19.1',
'ENSG00000273982' => 'RP11-332H18.7',
'ENSG00000278751' => 'AC005901.1',
'ENSMUSG00000000093' => 'Tbx2',
'ENSMUSG00000000094' => 'Tbx4',
'ENSMUSG00000018068' => 'Ints2',
'ENSMUSG00000034297' => 'Med13',
'ENSMUSG00000034329' => 'Brip1',
'ENSMUSG00000059439' => 'Bcas3',
'ENSMUSG00000069785' => 'Gm11444',
'ENSMUSG00000080823' => 'Atp5l-ps2',
'ENSMUSG00000081632' => 'Gm11443',
'ENSMUSG00000085208' => 'Brip1os',
'ENSMUSG00000085514' => 'Bcas3os2',
'ENSMUSG00000086199' => 'Bcas3os1',
'ENSMUSG00000087013' => '2610027K06Rik',
'ENSMUSG00000089508' => 'Gm23473',
'ENSMUSG00000093278' => 'Mir5110',
'ENSDARG00000006120' => 'tbx2b',
'ENSDARG00000030058' => 'tbx4',
'ENSDARG00000074410' => 'brip1',
'ENSDARG00000084002' => '5S_rRNA',
'ENSDARG00000086181' => 'BX005052.1',
'ENSDARG00000090764' => 'bcas3',
'ENSDARG00000096918' => 'si:ch211-229g11.3',
'ENSDARG00000097072' => 'si:ch211-229g11.6',
'ENSDARG00000097266' => 'si:ch211-229g11.5',
'ENSDARG00000018025' => 'tbx2a',
'ENSDARG00000097120' => 'si:ch211-199d18.3'
)
$accession_table = array(
(int) 0 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0001',
'tax_id' => '9606',
'chromosome' => '17',
'seq_start' => '61126460',
'seq_end' => '61946035',
'region_length' => '819575',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
),
(int) 1 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0002',
'tax_id' => '10090',
'chromosome' => '11',
'seq_start' => '85613059',
'seq_end' => '86270571',
'region_length' => '657512',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
),
(int) 2 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0003',
'tax_id' => '7955',
'chromosome' => '10',
'seq_start' => '28712083',
'seq_end' => '28712350',
'region_length' => '267',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
),
(int) 3 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0004',
'tax_id' => '7955',
'chromosome' => '15',
'seq_start' => '26449307',
'seq_end' => '26854804',
'region_length' => '405497',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
),
(int) 4 => array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0005',
'tax_id' => '7955',
'chromosome' => '5',
'seq_start' => '57841765',
'seq_end' => '58150987',
'region_length' => '309222',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
)
)
$all_tissues = array(
(int) 0 => 'Adipose',
(int) 31 => 'Adrenal',
(int) 64 => 'Bladder',
(int) 89 => 'Brain',
(int) 143 => 'Breast',
(int) 175 => 'Colon',
(int) 207 => 'Heart',
(int) 256 => 'Kidney',
(int) 303 => 'Liver',
(int) 342 => 'Lung',
(int) 378 => 'Muscle',
(int) 419 => 'Ovary',
(int) 464 => 'Placenta',
(int) 501 => 'Testis'
)
$column_titles = array(
(int) 0 => 'Region Sub-Accession',
(int) 1 => 'Tax ID',
(int) 2 => 'Position',
(int) 3 => 'Region Length'
)
$geneviewer = array(
(int) 9606 => array(
'version' => 'GRCh38',
'coord_key' => 'Homo sapiens',
'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCh38.2bit',
'bwgURI' => '/static/files/GRCh38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 10090 => array(
'version' => 'GRCm38',
'coord_key' => 'Mus musculus',
'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
'desc' => 'Gene structures from GENCODE 19',
'twoBitURI' => '/static/files/GRCm38.2bit',
'bwgURI' => '/static/files/GRCm38.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
),
(int) 7955 => array(
'version' => 'Zv9',
'coord_key' => 'Danio rerio',
'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
'twoBitURI' => '/static/files/Zv9.2bit',
'bwgURI' => '/static/files/Zv9.77.bb',
'stylesheet_uri' => '/static/files/gencode.xml',
'collapseSuperGroups' => 'true',
'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
)
)
$transcript_count = (int) 160
$longest_tissue_len = (int) 8
$transcript_data = array(
'ENST00000251334' => array(
'start' => '61867249',
'end' => '61927991',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-002'
),
'ENST00000444766' => array(
'start' => '61865370',
'end' => '61928016',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-001'
),
'ENST00000578805' => array(
'start' => '61891577',
'end' => '61894186',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-004'
),
'ENST00000583076' => array(
'start' => '61926408',
'end' => '61927426',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-003'
),
'ENST00000583822' => array(
'start' => '61872023',
'end' => '61885005',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-006'
),
'ENST00000584967' => array(
'start' => '61877981',
'end' => '61885290',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'INTS2-005'
),
'ENST00000617492' => array(
'start' => '61865367',
'end' => '61927105',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'INTS2-201'
),
'ENST00000397786' => array(
'start' => '61942605',
'end' => '62065282',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MED13-001'
),
'ENST00000578132' => array(
'start' => '62029298',
'end' => '62033825',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MED13-005'
),
'ENST00000580896' => array(
'start' => '62031513',
'end' => '62032473',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'MED13-004'
),
'ENST00000581994' => array(
'start' => '62029277',
'end' => '62031489',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MED13-002'
),
'ENST00000582786' => array(
'start' => '61955311',
'end' => '61955763',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'MED13-006'
),
'ENST00000583958' => array(
'start' => '62010427',
'end' => '62030000',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'MED13-003'
),
'ENST00000240328' => array(
'start' => '61399896',
'end' => '61409425',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX2-001'
),
'ENST00000419047' => array(
'start' => '61399910',
'end' => '61409466',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'TBX2-002'
),
'ENST00000477081' => array(
'start' => '61400365',
'end' => '61409124',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TBX2-003'
),
'ENST00000586986' => array(
'start' => '61408722',
'end' => '61409466',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX2-005'
),
'ENST00000240335' => array(
'start' => '61456446',
'end' => '61484303',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX4-002'
),
'ENST00000393853' => array(
'start' => '61452418',
'end' => '61485110',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX4-001'
),
'ENST00000586874' => array(
'start' => '61478363',
'end' => '61481346',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX4-007'
),
'ENST00000589003' => array(
'start' => '61452404',
'end' => '61478740',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'TBX4-003'
),
'ENST00000589449' => array(
'start' => '61478351',
'end' => '61483370',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX4-006'
),
'ENST00000590174' => array(
'start' => '61465793',
'end' => '61480275',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'TBX4-008'
),
'ENST00000593249' => array(
'start' => '61464214',
'end' => '61478789',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'TBX4-005'
),
'ENST00000259008' => array(
'start' => '61681266',
'end' => '61863521',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-001'
),
'ENST00000577598' => array(
'start' => '61684772',
'end' => '61861539',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-002'
),
'ENST00000577913' => array(
'start' => '61857228',
'end' => '61863344',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-003'
),
'ENST00000579028' => array(
'start' => '61776401',
'end' => '61793673',
'transcript_biotype' => 'nonsense_mediated_decay',
'transcript_name' => 'BRIP1-005'
),
'ENST00000583837' => array(
'start' => '61775878',
'end' => '61780277',
'transcript_biotype' => 'processed_transcript',
'transcript_name' => 'BRIP1-004'
),
'ENST00000584322' => array(
'start' => '61739057',
'end' => '61776480',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BRIP1-006'
),
'ENST00000390652' => array(
'start' => '60677889',
'end' => '61392838',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-001'
),
'ENST00000407086' => array(
'start' => '60677872',
'end' => '61392831',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-002'
),
'ENST00000408905' => array(
'start' => '60679458',
'end' => '61392831',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-013'
),
'ENST00000585744' => array(
'start' => '60887050',
'end' => '61392125',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'BCAS3-005'
),
'ENST00000585812' => array(
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'start' => '26652167',
'end' => '26654900',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-001'
),
'ENSDART00000154027' => array(
'start' => '26653015',
'end' => '26653558',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-007'
),
'ENSDART00000154128' => array(
'start' => '26652348',
'end' => '26654804',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-005'
),
'ENSDART00000154706' => array(
'start' => '26653931',
'end' => '26655523',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-003'
),
'ENSDART00000154800' => array(
'start' => '26652672',
'end' => '26655976',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-011'
),
'ENSDART00000155420' => array(
'start' => '26652180',
'end' => '26655528',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-002'
),
'ENSDART00000155627' => array(
'start' => '26652576',
'end' => '26653283',
'transcript_biotype' => 'retained_intron',
'transcript_name' => 'si:ch211-229g11.5-008'
),
'ENSDART00000155944' => array(
'start' => '26652408',
'end' => '26655523',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-010'
),
'ENSDART00000156217' => array(
'start' => '26652838',
'end' => '26654737',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-009'
),
'ENSDART00000156379' => array(
'start' => '26652176',
'end' => '26654789',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-229g11.5-006'
),
'ENSDART00000024207' => array(
'start' => '57913901',
'end' => '57923009',
'transcript_biotype' => 'protein_coding',
'transcript_name' => 'tbx2a-001'
),
'ENSDART00000154265' => array(
'start' => '57883917',
'end' => '57917387',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-199d18.3-001'
),
'ENSDART00000155869' => array(
'start' => '57899917',
'end' => '57915982',
'transcript_biotype' => 'antisense',
'transcript_name' => 'si:ch211-199d18.3-002'
)
)
$accession_map = array(
'ENST000' => '9606',
'ENSMUST' => '10090',
'ENSDART' => '7955',
'ENSG000' => '9606',
'ENSMUSG' => '10090',
'ENSDARG' => '7955'
)
$sci_name_map = array(
(int) 9606 => 'Homo_sapiens',
(int) 10090 => 'Mus_musculus',
(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
'CIL_0007JV_0001' => array(
'genes_in_region' => array(
'ENSG00000108506' => array(
[maximum depth reached]
),
'ENSG00000108510' => array(
[maximum depth reached]
),
'ENSG00000121068' => array(
[maximum depth reached]
),
'ENSG00000121075' => array(
[maximum depth reached]
),
'ENSG00000136492' => array(
[maximum depth reached]
),
'ENSG00000141376' => array(
[maximum depth reached]
),
'ENSG00000187013' => array(
[maximum depth reached]
),
'ENSG00000202361' => array(
[maximum depth reached]
),
'ENSG00000253506' => array(
[maximum depth reached]
),
'ENSG00000266934' => array(
[maximum depth reached]
),
'ENSG00000267137' => array(
[maximum depth reached]
),
'ENSG00000267280' => array(
[maximum depth reached]
),
'ENSG00000267667' => array(
[maximum depth reached]
),
'ENSG00000273982' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Breast',
(int) 1 => 'Colon',
(int) 2 => 'Lung',
(int) 3 => 'Muscle',
(int) 4 => 'Testis',
(int) 5 => 'Lung',
(int) 6 => 'Testis',
(int) 7 => 'Adipose',
(int) 8 => 'Adrenal',
(int) 9 => 'Bladder',
(int) 10 => 'Brain',
(int) 11 => 'Breast',
(int) 12 => 'Colon',
(int) 13 => 'Heart',
(int) 14 => 'Kidney',
(int) 15 => 'Liver',
(int) 16 => 'Lung',
(int) 17 => 'Muscle',
(int) 18 => 'Ovary',
(int) 19 => 'Placenta',
(int) 20 => 'Testis',
(int) 21 => 'Adipose',
(int) 22 => 'Adrenal',
(int) 23 => 'Bladder',
(int) 24 => 'Brain',
(int) 25 => 'Breast',
(int) 26 => 'Colon',
(int) 27 => 'Heart',
(int) 28 => 'Kidney',
(int) 29 => 'Liver',
(int) 30 => 'Lung',
(int) 31 => 'Muscle',
(int) 32 => 'Ovary',
(int) 33 => 'Placenta',
(int) 34 => 'Testis',
(int) 35 => 'Adipose',
(int) 36 => 'Adrenal',
(int) 37 => 'Bladder',
(int) 38 => 'Brain',
(int) 39 => 'Breast',
(int) 40 => 'Colon',
(int) 41 => 'Heart',
(int) 42 => 'Kidney',
(int) 43 => 'Liver',
(int) 44 => 'Lung',
(int) 45 => 'Muscle',
(int) 46 => 'Ovary',
(int) 47 => 'Placenta',
(int) 48 => 'Testis',
(int) 49 => 'Adipose',
(int) 50 => 'Adrenal',
(int) 51 => 'Colon',
(int) 52 => 'Kidney',
(int) 53 => 'Liver',
(int) 54 => 'Ovary',
(int) 55 => 'Placenta',
(int) 56 => 'Testis',
(int) 57 => 'Adrenal',
(int) 58 => 'Bladder',
(int) 59 => 'Brain',
(int) 60 => 'Breast',
(int) 61 => 'Colon',
(int) 62 => 'Heart',
(int) 63 => 'Kidney',
(int) 64 => 'Liver',
(int) 65 => 'Lung',
(int) 66 => 'Ovary',
(int) 67 => 'Testis',
(int) 68 => 'Adipose',
(int) 69 => 'Adrenal',
(int) 70 => 'Brain',
(int) 71 => 'Breast',
(int) 72 => 'Colon',
(int) 73 => 'Kidney',
(int) 74 => 'Lung',
(int) 75 => 'Ovary',
(int) 76 => 'Placenta',
(int) 77 => 'Testis',
(int) 78 => 'Adipose',
(int) 79 => 'Heart',
(int) 80 => 'Lung',
(int) 81 => 'Muscle',
(int) 82 => 'Ovary',
(int) 83 => 'Placenta',
(int) 84 => 'Testis',
(int) 85 => 'Adipose',
(int) 86 => 'Breast',
(int) 87 => 'Heart',
(int) 88 => 'Liver',
(int) 89 => 'Adrenal',
(int) 90 => 'Colon',
(int) 91 => 'Kidney',
(int) 92 => 'Liver',
(int) 93 => 'Adipose',
(int) 94 => 'Lung',
(int) 95 => 'Ovary',
(int) 96 => 'Adipose',
(int) 97 => 'Adrenal',
(int) 98 => 'Bladder',
(int) 99 => 'Brain',
(int) 100 => 'Breast',
(int) 101 => 'Colon',
(int) 102 => 'Heart',
(int) 103 => 'Kidney',
(int) 104 => 'Liver',
(int) 105 => 'Lung',
(int) 106 => 'Muscle',
(int) 107 => 'Ovary',
(int) 108 => 'Placenta',
(int) 109 => 'Testis',
(int) 110 => 'Brain',
(int) 111 => 'Colon',
(int) 112 => 'Liver',
(int) 113 => 'Lung',
(int) 114 => 'Muscle',
(int) 115 => 'Placenta',
(int) 116 => 'Adipose',
(int) 117 => 'Adrenal',
(int) 118 => 'Breast',
(int) 119 => 'Lung',
(int) 120 => 'Muscle',
(int) 121 => 'Adipose',
(int) 122 => 'Adrenal',
(int) 123 => 'Brain',
(int) 124 => 'Heart',
(int) 125 => 'Muscle',
(int) 126 => 'Placenta',
(int) 127 => 'Testis',
(int) 128 => 'Adipose',
(int) 129 => 'Brain',
(int) 130 => 'Colon',
(int) 131 => 'Heart',
(int) 132 => 'Kidney',
(int) 133 => 'Liver',
(int) 134 => 'Ovary',
(int) 135 => 'Placenta',
(int) 136 => 'Testis',
(int) 137 => 'Ovary',
(int) 138 => 'Placenta',
(int) 139 => 'Breast',
(int) 140 => 'Muscle',
(int) 141 => 'Ovary',
(int) 142 => 'Placenta',
(int) 143 => 'Testis',
(int) 144 => 'Ovary',
(int) 145 => 'Lung',
(int) 146 => 'Ovary',
(int) 147 => 'Breast',
(int) 148 => 'Adipose',
(int) 149 => 'Adrenal',
(int) 150 => 'Bladder',
(int) 151 => 'Adrenal',
(int) 152 => 'Bladder',
(int) 153 => 'Brain',
(int) 154 => 'Breast',
(int) 155 => 'Colon',
(int) 156 => 'Heart',
(int) 157 => 'Kidney',
(int) 158 => 'Liver',
(int) 159 => 'Lung',
(int) 160 => 'Muscle',
(int) 161 => 'Ovary',
(int) 162 => 'Placenta',
(int) 163 => 'Testis',
(int) 164 => 'Colon',
(int) 165 => 'Heart',
(int) 166 => 'Liver',
(int) 167 => 'Testis',
(int) 168 => 'Ovary',
(int) 169 => 'Muscle',
(int) 170 => 'Bladder',
(int) 171 => 'Brain',
(int) 172 => 'Breast',
(int) 173 => 'Colon',
(int) 174 => 'Heart',
(int) 175 => 'Kidney',
(int) 176 => 'Liver',
(int) 177 => 'Lung',
(int) 178 => 'Ovary',
(int) 179 => 'Adipose',
(int) 180 => 'Adrenal',
(int) 181 => 'Brain',
(int) 182 => 'Breast',
(int) 183 => 'Colon',
(int) 184 => 'Heart',
(int) 185 => 'Kidney',
(int) 186 => 'Liver',
(int) 187 => 'Lung',
(int) 188 => 'Muscle',
(int) 189 => 'Ovary',
(int) 190 => 'Placenta',
(int) 191 => 'Testis',
(int) 192 => 'Testis',
(int) 193 => 'Adipose',
(int) 194 => 'Adrenal',
(int) 195 => 'Brain',
(int) 196 => 'Breast',
(int) 197 => 'Colon',
(int) 198 => 'Heart',
(int) 199 => 'Kidney',
(int) 200 => 'Liver',
(int) 201 => 'Lung',
(int) 202 => 'Muscle',
(int) 203 => 'Ovary',
(int) 204 => 'Placenta',
(int) 205 => 'Testis',
(int) 206 => 'Adrenal',
(int) 207 => 'Bladder',
(int) 208 => 'Brain',
(int) 209 => 'Heart',
(int) 210 => 'Kidney',
(int) 211 => 'Muscle',
(int) 212 => 'Ovary',
(int) 213 => 'Placenta',
(int) 214 => 'Testis',
(int) 215 => 'Adrenal',
(int) 216 => 'Brain',
(int) 217 => 'Heart',
(int) 218 => 'Kidney',
(int) 219 => 'Lung',
(int) 220 => 'Ovary',
(int) 221 => 'Testis',
(int) 222 => 'Lung',
(int) 223 => 'Testis',
(int) 224 => 'Lung',
(int) 225 => 'Breast',
(int) 226 => 'Liver',
(int) 227 => 'Testis',
(int) 228 => 'Adipose',
(int) 229 => 'Adrenal',
(int) 230 => 'Brain',
(int) 231 => 'Colon',
(int) 232 => 'Heart',
(int) 233 => 'Kidney',
(int) 234 => 'Lung',
(int) 235 => 'Muscle',
(int) 236 => 'Ovary',
(int) 237 => 'Placenta',
(int) 238 => 'Testis',
(int) 239 => 'Adipose',
(int) 240 => 'Adrenal',
(int) 241 => 'Bladder',
(int) 242 => 'Kidney',
(int) 243 => 'Muscle',
(int) 244 => 'Ovary',
(int) 245 => 'Placenta',
(int) 246 => 'Testis',
(int) 247 => 'Breast',
(int) 248 => 'Lung',
(int) 249 => 'Muscle',
(int) 250 => 'Ovary',
(int) 251 => 'Adipose',
(int) 252 => 'Adrenal',
(int) 253 => 'Brain',
(int) 254 => 'Breast',
(int) 255 => 'Colon',
(int) 256 => 'Heart',
(int) 257 => 'Liver',
(int) 258 => 'Lung',
(int) 259 => 'Muscle',
(int) 260 => 'Ovary',
(int) 261 => 'Placenta',
(int) 262 => 'Testis',
(int) 263 => 'Adrenal',
(int) 264 => 'Heart',
(int) 265 => 'Kidney',
(int) 266 => 'Lung',
(int) 267 => 'Ovary'
)
),
'CIL_0007JV_0002' => array(
'genes_in_region' => array(
'ENSMUSG00000000093' => array(
[maximum depth reached]
),
'ENSMUSG00000000094' => array(
[maximum depth reached]
),
'ENSMUSG00000018068' => array(
[maximum depth reached]
),
'ENSMUSG00000034297' => array(
[maximum depth reached]
),
'ENSMUSG00000034329' => array(
[maximum depth reached]
),
'ENSMUSG00000059439' => array(
[maximum depth reached]
),
'ENSMUSG00000069785' => array(
[maximum depth reached]
),
'ENSMUSG00000080823' => array(
[maximum depth reached]
),
'ENSMUSG00000085208' => array(
[maximum depth reached]
),
'ENSMUSG00000085514' => array(
[maximum depth reached]
),
'ENSMUSG00000086199' => array(
[maximum depth reached]
),
'ENSMUSG00000087013' => array(
[maximum depth reached]
),
'ENSMUSG00000089508' => array(
[maximum depth reached]
),
'ENSMUSG00000093278' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Adipose',
(int) 1 => 'Adrenal',
(int) 2 => 'Bladder',
(int) 3 => 'Brain',
(int) 4 => 'Breast',
(int) 5 => 'Colon',
(int) 6 => 'Heart',
(int) 7 => 'Kidney',
(int) 8 => 'Liver',
(int) 9 => 'Lung',
(int) 10 => 'Muscle',
(int) 11 => 'Ovary',
(int) 12 => 'Placenta',
(int) 13 => 'Testis',
(int) 14 => 'Adipose',
(int) 15 => 'Bladder',
(int) 16 => 'Breast',
(int) 17 => 'Heart',
(int) 18 => 'Kidney',
(int) 19 => 'Liver',
(int) 20 => 'Lung',
(int) 21 => 'Muscle',
(int) 22 => 'Placenta',
(int) 23 => 'Testis',
(int) 24 => 'Adipose',
(int) 25 => 'Adrenal',
(int) 26 => 'Bladder',
(int) 27 => 'Brain',
(int) 28 => 'Breast',
(int) 29 => 'Colon',
(int) 30 => 'Heart',
(int) 31 => 'Kidney',
(int) 32 => 'Liver',
(int) 33 => 'Muscle',
(int) 34 => 'Ovary',
(int) 35 => 'Placenta',
(int) 36 => 'Testis',
(int) 37 => 'Bladder',
(int) 38 => 'Brain',
(int) 39 => 'Heart',
(int) 40 => 'Liver',
(int) 41 => 'Lung',
(int) 42 => 'Muscle',
(int) 43 => 'Placenta',
(int) 44 => 'Adipose',
(int) 45 => 'Adrenal',
(int) 46 => 'Bladder',
(int) 47 => 'Brain',
(int) 48 => 'Colon',
(int) 49 => 'Kidney',
(int) 50 => 'Liver',
(int) 51 => 'Ovary',
(int) 52 => 'Placenta',
(int) 53 => 'Testis',
(int) 54 => 'Adipose',
(int) 55 => 'Adrenal',
(int) 56 => 'Brain',
(int) 57 => 'Colon',
(int) 58 => 'Ovary',
(int) 59 => 'Placenta',
(int) 60 => 'Testis',
(int) 61 => 'Adipose',
(int) 62 => 'Adrenal',
(int) 63 => 'Bladder',
(int) 64 => 'Brain',
(int) 65 => 'Breast',
(int) 66 => 'Colon',
(int) 67 => 'Heart',
(int) 68 => 'Kidney',
(int) 69 => 'Liver',
(int) 70 => 'Lung',
(int) 71 => 'Muscle',
(int) 72 => 'Ovary',
(int) 73 => 'Placenta',
(int) 74 => 'Testis',
(int) 75 => 'Adipose',
(int) 76 => 'Adrenal',
(int) 77 => 'Bladder',
(int) 78 => 'Brain',
(int) 79 => 'Breast',
(int) 80 => 'Colon',
(int) 81 => 'Heart',
(int) 82 => 'Kidney',
(int) 83 => 'Liver',
(int) 84 => 'Lung',
(int) 85 => 'Muscle',
(int) 86 => 'Ovary',
(int) 87 => 'Placenta',
(int) 88 => 'Testis',
(int) 89 => 'Breast',
(int) 90 => 'Colon',
(int) 91 => 'Ovary',
(int) 92 => 'Colon',
(int) 93 => 'Muscle',
(int) 94 => 'Brain',
(int) 95 => 'Brain',
(int) 96 => 'Breast',
(int) 97 => 'Liver',
(int) 98 => 'Ovary',
(int) 99 => 'Placenta',
(int) 100 => 'Testis',
(int) 101 => 'Muscle',
(int) 102 => 'Ovary',
(int) 103 => 'Colon',
(int) 104 => 'Heart',
(int) 105 => 'Muscle',
(int) 106 => 'Testis',
(int) 107 => 'Adipose',
(int) 108 => 'Adrenal',
(int) 109 => 'Bladder',
(int) 110 => 'Brain',
(int) 111 => 'Breast',
(int) 112 => 'Colon',
(int) 113 => 'Heart',
(int) 114 => 'Kidney',
(int) 115 => 'Liver',
(int) 116 => 'Lung',
(int) 117 => 'Muscle',
(int) 118 => 'Ovary',
(int) 119 => 'Placenta',
(int) 120 => 'Testis',
(int) 121 => 'Bladder',
(int) 122 => 'Placenta',
(int) 123 => 'Adrenal',
(int) 124 => 'Ovary',
(int) 125 => 'Placenta',
(int) 126 => 'Adipose',
(int) 127 => 'Adrenal',
(int) 128 => 'Bladder',
(int) 129 => 'Brain',
(int) 130 => 'Breast',
(int) 131 => 'Colon',
(int) 132 => 'Heart',
(int) 133 => 'Kidney',
(int) 134 => 'Liver',
(int) 135 => 'Lung',
(int) 136 => 'Muscle',
(int) 137 => 'Ovary',
(int) 138 => 'Placenta',
(int) 139 => 'Testis',
(int) 140 => 'Adrenal',
(int) 141 => 'Brain',
(int) 142 => 'Breast',
(int) 143 => 'Kidney',
(int) 144 => 'Lung',
(int) 145 => 'Ovary',
(int) 146 => 'Testis',
(int) 147 => 'Adipose',
(int) 148 => 'Bladder',
(int) 149 => 'Brain',
(int) 150 => 'Breast',
(int) 151 => 'Heart',
(int) 152 => 'Kidney',
(int) 153 => 'Liver',
(int) 154 => 'Muscle',
(int) 155 => 'Ovary',
(int) 156 => 'Placenta',
(int) 157 => 'Adipose',
(int) 158 => 'Adrenal',
(int) 159 => 'Bladder',
(int) 160 => 'Brain',
(int) 161 => 'Breast',
(int) 162 => 'Colon',
(int) 163 => 'Heart',
(int) 164 => 'Kidney',
(int) 165 => 'Liver',
(int) 166 => 'Lung',
(int) 167 => 'Ovary',
(int) 168 => 'Placenta',
(int) 169 => 'Adipose',
(int) 170 => 'Adrenal',
(int) 171 => 'Bladder',
(int) 172 => 'Brain',
(int) 173 => 'Breast',
(int) 174 => 'Colon',
(int) 175 => 'Heart',
(int) 176 => 'Kidney',
(int) 177 => 'Liver',
(int) 178 => 'Lung',
(int) 179 => 'Ovary',
(int) 180 => 'Placenta',
(int) 181 => 'Testis',
(int) 182 => 'Brain',
(int) 183 => 'Heart',
(int) 184 => 'Kidney',
(int) 185 => 'Liver',
(int) 186 => 'Lung',
(int) 187 => 'Muscle',
(int) 188 => 'Ovary',
(int) 189 => 'Placenta',
(int) 190 => 'Testis',
(int) 191 => 'Adipose',
(int) 192 => 'Adrenal',
(int) 193 => 'Brain',
(int) 194 => 'Breast',
(int) 195 => 'Colon',
(int) 196 => 'Heart',
(int) 197 => 'Kidney',
(int) 198 => 'Liver',
(int) 199 => 'Muscle',
(int) 200 => 'Ovary',
(int) 201 => 'Placenta',
(int) 202 => 'Testis',
(int) 203 => 'Liver',
(int) 204 => 'Bladder',
(int) 205 => 'Lung',
(int) 206 => 'Bladder',
(int) 207 => 'Ovary',
(int) 208 => 'Testis',
(int) 209 => 'Heart'
)
),
'CIL_0007JV_0004' => array(
'genes_in_region' => array(
'ENSDARG00000006120' => array(
[maximum depth reached]
),
'ENSDARG00000030058' => array(
[maximum depth reached]
),
'ENSDARG00000074410' => array(
[maximum depth reached]
),
'ENSDARG00000086181' => array(
[maximum depth reached]
),
'ENSDARG00000090764' => array(
[maximum depth reached]
),
'ENSDARG00000096918' => array(
[maximum depth reached]
),
'ENSDARG00000097072' => array(
[maximum depth reached]
),
'ENSDARG00000097266' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Brain',
(int) 4 => 'Heart',
(int) 5 => 'Liver',
(int) 6 => 'Brain',
(int) 7 => 'Heart',
(int) 8 => 'Kidney',
(int) 9 => 'Brain',
(int) 10 => 'Kidney',
(int) 11 => 'Brain',
(int) 12 => 'Heart',
(int) 13 => 'Kidney',
(int) 14 => 'Brain',
(int) 15 => 'Heart',
(int) 16 => 'Kidney',
(int) 17 => 'Muscle',
(int) 18 => 'Brain',
(int) 19 => 'Heart',
(int) 20 => 'Kidney',
(int) 21 => 'Liver',
(int) 22 => 'Muscle',
(int) 23 => 'Brain',
(int) 24 => 'Heart',
(int) 25 => 'Kidney',
(int) 26 => 'Muscle',
(int) 27 => 'Brain',
(int) 28 => 'Heart',
(int) 29 => 'Kidney',
(int) 30 => 'Liver',
(int) 31 => 'Muscle',
(int) 32 => 'Brain',
(int) 33 => 'Brain',
(int) 34 => 'Heart',
(int) 35 => 'Kidney',
(int) 36 => 'Liver',
(int) 37 => 'Muscle',
(int) 38 => 'Brain',
(int) 39 => 'Heart',
(int) 40 => 'Kidney',
(int) 41 => 'Liver',
(int) 42 => 'Brain',
(int) 43 => 'Muscle',
(int) 44 => 'Heart',
(int) 45 => 'Brain',
(int) 46 => 'Heart',
(int) 47 => 'Kidney',
(int) 48 => 'Muscle',
(int) 49 => 'Brain',
(int) 50 => 'Heart',
(int) 51 => 'Kidney',
(int) 52 => 'Brain',
(int) 53 => 'Kidney',
(int) 54 => 'Brain',
(int) 55 => 'Brain',
(int) 56 => 'Heart',
(int) 57 => 'Brain'
)
),
'CIL_0007JV_0005' => array(
'genes_in_region' => array(
'ENSDARG00000018025' => array(
[maximum depth reached]
)
),
'tissues_title' => array(
(int) 0 => 'Brain',
(int) 1 => 'Heart',
(int) 2 => 'Kidney',
(int) 3 => 'Liver',
(int) 4 => 'Muscle',
(int) 5 => 'Kidney'
)
)
)
$accession = array(
'region_elements' => array(
'region_element_id' => 'CIL_0007JV_0003',
'tax_id' => '7955',
'chromosome' => '10',
'seq_start' => '28712083',
'seq_end' => '28712350',
'region_length' => '267',
'region_type' => 'UCNEbase',
'el_id' => 'TBX2'
)
)
$gene_el = array(
'ENSMUST00000175537' => array(
'Heart' => array(
'average_FPKM' => '24734.801',
'stddev_FPKM' => '0.00'
)
)
)
$gene_key = 'ENSMUSG00000093278'
$is_first = false
$tran_el = array(
'Heart' => array(
'average_FPKM' => '24734.801',
'stddev_FPKM' => '0.00'
)
)
$tran_key = 'ENSMUST00000175537'
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108