C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vacuolar protein sorting 39 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000074471 vps39 7955 + 17:50604778-50640374 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000113644 vps39-201 50604778-50640374 protein_coding
  ENSDART00000156303 vps39-001 50606615-50640350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverENSDART00000113644ENSDART00000156303
Transcript ID Brain Heart Liver
ENSDART00000113644 1.946±0.00 1.239±0.00 N/A
ENSDART00000156303 0.332±0.08 2.663±0.20 0.682±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001654 IMP eye development
GO:0005083 IEA small GTPase regulator activity
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0048066 IMP developmental pigmentation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166887 VPS39 vacuolar protein sorting 39 homolog (S. cerevisiae) protein_coding Homo_sapiens
ENSMUSG00000027291 Vps39 vacuolar protein sorting 39 (yeast) protein_coding Mus_musculus

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