C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 39 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000113644 vps39-201 ENSDARG00000074471 7955 + 17:50604778-50640374 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENSDART00000113644
Transcript ID Brain Heart
ENSDART00000113644 1.946±0.00 1.239±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001654 IMP eye development
GO:0005083 IEA small GTPase regulator activity
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0048066 IMP developmental pigmentation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318006 VPS39-001 protein_coding Homo_sapiens 0 1430
ENST00000348544 VPS39-002 protein_coding Homo_sapiens 0 1347
ENST00000568357 VPS39-004 processed_transcript Homo_sapiens 3.00004e-41 172

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