C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family A (ABC1), member 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000074635 abca1a 7955 + 1:53057931-53123070 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000139378 abca1a-002 53057931-53060613 retained_intron
  ENSDART00000142465 abca1a-001 53057961-53123070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000142465
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000142465 16.716±0.00 9.077±2.50 15.998±0.00 22.474±0.00 7.304±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022C CIL_00022C_0001 CGP 1:53057931-53147096

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0016887 IEA ATPase activity
GO:0017111 IEA nucleoside-triphosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165029 ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 protein_coding Homo_sapiens
ENSMUSG00000015243 Abca1 ATP-binding cassette, sub-family A (ABC1), member 1 protein_coding Mus_musculus

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