C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: remodeling and spacing factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000074737 RSF1 (2 of 3) 7955 - 18:47273864-47295117 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000112648 RSF1 (2 of 3)-201 47273922-47295061 protein_coding
  ENSDART00000150987 RSF1 (2 of 3)-001 47273864-47284374 protein_coding
  ENSDART00000151702 RSF1 (2 of 3)-002 47286079-47295117 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000112648ENSDART00000150987ENSDART00000151702
Transcript ID Brain Heart Liver Muscle
ENSDART00000112648 2.565±1.01 0.156±0.06 0.036±0.00 0.313±0.00
ENSDART00000150987 1.052±0.00 0.919±0.78 0.170±0.00 N/A
ENSDART00000151702 N/A N/A 0.226±0.00 0.311±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JG CIL_0001JG_0001 CGP 18:47273864-47313692

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000048649 RSF1 remodeling and spacing factor 1 protein_coding Homo_sapiens
ENSMUSG00000035623 Rsf1 remodeling and spacing factor 1 protein_coding Mus_musculus

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