C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family A (ABC1), member 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000074749 abca12 7955 - 9:41758656-41838911 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000109197 abca12-201 41759479-41794424 protein_coding
  ENSDART00000138634 abca12-001 41758656-41838911 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000109197ENSDART00000138634
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000109197 N/A 0.282±0.00 N/A 0.042±0.00 0.303±0.00
ENSDART00000138634 0.254±0.15 0.324±0.33 1.855±0.00 N/A 0.480±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AP CIL_0000AP_0001 CGP 9:41707564-41838911

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0016887 IEA ATPase activity
GO:0017111 IEA nucleoside-triphosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000144452 ABCA12 ATP-binding cassette, sub-family A (ABC1), member 12 protein_coding Homo_sapiens
ENSMUSG00000050296 Abca12 ATP-binding cassette, sub-family A (ABC1), member 12 protein_coding Mus_musculus

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