C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cold shock domain containing E1, RNA-binding
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000074758 csde1 7955 - 8:23129314-23150130 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000112085 csde1-202 23129986-23141257 protein_coding
  ENSDART00000132680 csde1-002 23143613-23146535 processed_transcript
  ENSDART00000134542 csde1-001 23129314-23150130 protein_coding
  ENSDART00000135640 csde1-003 23141156-23146261 processed_transcript
  ENSDART00000140606 csde1-005 23133340-23139402 protein_coding
  ENSDART00000144041 csde1-004 23138591-23146173 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000132680ENSDART00000134542ENSDART00000135640
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000132680 19.632±1.02 41.431±6.20 49.410±0.00 6.201±0.00 N/A
ENSDART00000134542 7.131±1.54 20.659±4.91 18.869±0.00 3.966±0.00 7.612±0.00
ENSDART00000135640 N/A 47.453±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000009307 CSDE1 cold shock domain containing E1, RNA-binding protein_coding Homo_sapiens
ENSMUSG00000068823 Csde1 cold shock domain containing E1, RNA binding protein_coding Mus_musculus

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