C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006FW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075459-ENSDARG00000095378 CGP 7955 13:31401425-31513227
GeneTranscriptPositionBiotype
ENSDARG00000075459 (ptpn20)
protein tyrosine phosphatase, non-receptor type 20 		ENSDART00000111705 (ptpn20-201) 31401425-31454811 protein_coding
ENSDART00000132326 (ptpn20-006) 31429041-31449962 protein_coding
ENSDART00000133774 (ptpn20-002) 31403686-31404612 protein_coding
ENSDART00000137664 (ptpn20-003) 31405705-31406146 protein_coding
ENSDART00000144568 (ptpn20-001) 31401536-31402138 protein_coding
ENSDART00000147085 (ptpn20-004) 31408398-31409385 protein_coding
ENSDART00000147936 (ptpn20-005) 31416105-31420193 protein_coding
ENSDARG00000093728 (si:ch211-223a10.5)
si:ch211-223a10.5 		ENSDART00000147293 (si:ch211-223a10.5-001) 31417087-31428795 processed_transcript
ENSDARG00000095378 (gdf10a)
growth differentiation factor 10a 		ENSDART00000142725 (gdf10a-002) 31509678-31513024 protein_coding
ENSDART00000148352 (gdf10a-001) 31509262-31513227 protein_coding
CIL_0006FW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204179-ENSG00000266524 CGP 9606 10:46911396-47313547
GeneTranscriptPositionBiotype
ENSG00000204179 (PTPN20A)
protein tyrosine phosphatase, non-receptor type 20A 		ENST00000374218 (PTPN20A-201) 46911438-47002320 protein_coding
ENST00000374339 (PTPN20A-001) 46932423-47000789 protein_coding
ENST00000374342 (PTPN20A-027) 46911396-47002322 protein_coding
ENST00000374346 (PTPN20A-002) 46911435-47002320 protein_coding
ENST00000395721 (PTPN20A-007) 46911438-47002322 protein_coding
ENST00000395722 (PTPN20A-022) 46911428-47002322 protein_coding
ENST00000395725 (PTPN20A-202) 46911438-47002320 protein_coding
ENST00000395727 (PTPN20A-004) 46911781-47000789 protein_coding
ENST00000417004 (PTPN20A-016) 46911428-46999950 protein_coding
ENST00000437863 (PTPN20A-019) 46940582-47002488 nonsense_mediated_decay
ENST00000466912 (PTPN20A-028) 46932466-46946842 retained_intron
ENST00000502254 (PTPN20A-010) 46932417-47000788 protein_coding
ENST00000502705 (PTPN20A-013) 46911781-47000789 protein_coding
ENST00000503851 (PTPN20A-018) 46911781-47000789 protein_coding
ENST00000505814 (PTPN20A-005) 46911781-47000789 protein_coding
ENST00000506080 (PTPN20A-009) 46911781-47000789 protein_coding
ENST00000506881 (PTPN20A-017) 46925998-46943992 protein_coding
ENST00000508357 (PTPN20A-020) 46920901-46981654 nonsense_mediated_decay
ENST00000508602 (PTPN20A-015) 46932423-47000789 protein_coding
ENST00000508715 (PTPN20A-026) 46911781-47000789 protein_coding
ENST00000509599 (PTPN20A-012) 46911781-47000789 protein_coding
ENST00000509774 (PTPN20A-014) 46911781-47000789 protein_coding
ENST00000509900 (PTPN20A-008) 46911781-47000789 protein_coding
ENST00000510335 (PTPN20A-021) 46911781-47000789 nonsense_mediated_decay
ENST00000511769 (PTPN20A-006) 46911781-47000789 protein_coding
ENST00000513156 (PTPN20A-003) 46911781-47000789 protein_coding
ENST00000513159 (PTPN20A-024) 46911781-47000789 protein_coding
ENST00000513266 (PTPN20A-011) 46911781-47000789 protein_coding
ENST00000513756 (PTPN20A-025) 46932417-47000788 protein_coding
ENSG00000266524 (GDF10)
growth differentiation factor 10 		ENST00000580279 (GDF10-001) 47300386-47313547 protein_coding
CIL_0006FW_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021940-ENSMUSG00000021943 CGP 10090 14:33589270-33935280
GeneTranscriptPositionBiotype
ENSMUSG00000021940 (Ptpn20)
protein tyrosine phosphatase, non-receptor type 20 		ENSMUST00000022508 (Ptpn20-201) 33589270-33640754 protein_coding
ENSMUSG00000021943 (Gdf10)
growth differentiation factor 10 		ENSMUST00000168727 (Gdf10-201) 33923587-33935280 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FW_0001ENSDARG00000075459ENSDART00000111705ENSDART00000132326ENSDART00000133774ENSDART00000137664ENSDART00000144568ENSDART00000147085ENSDART00000147936ENSDARG00000093728ENSDART00000147293ENSDARG00000095378ENSDART00000142725ENSDART00000148352CIL_0006FW_0002ENSG00000204179ENST00000374218ENST00000374339ENST00000374342ENST00000374346ENST00000395721ENST00000395722ENST00000395725ENST00000395727ENST00000417004ENST00000437863ENST00000466912ENST00000502254ENST00000502705ENST00000503851ENST00000505814ENST00000506080ENST00000506881ENST00000508357ENST00000508602ENST00000508715ENST00000509599ENST00000509774ENST00000509900ENST00000510335ENST00000511769ENST00000513156ENST00000513159ENST00000513266ENST00000513756ENSG00000266524ENST00000580279CIL_0006FW_0003ENSMUSG00000021940ENSMUST00000022508ENSMUSG00000021943ENSMUST00000168727
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FW_0001ENSDARG00000075459ENSDART00000111705ENSDART00000132326ENSDART00000133774ENSDART00000147936ENSDARG00000093728ENSDART00000147293ENSDARG00000095378ENSDART00000142725ENSDART00000148352CIL_0006FW_0002ENSG00000204179ENST00000374218ENST00000374339ENST00000374342ENST00000374346ENST00000395721ENST00000395722ENST00000395725ENST00000506881ENST00000508357ENST00000513266ENSG00000266524ENST00000580279CIL_0006FW_0003ENSMUSG00000021940ENSMUST00000022508ENSMUSG00000021943ENSMUST00000168727
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075459 ENSDART00000111705 N/A N/A N/A N/A N/A N/A 0.110±0.03 0.089±0.00 0.022±0.00 N/A 0.097±0.00 N/A N/A N/A
ENSDART00000132326 N/A N/A N/A N/A N/A N/A 0.308±0.24 0.344±0.00 N/A N/A 0.134±0.00 N/A N/A N/A
ENSDART00000133774 N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A
ENSDARG00000093728 ENSDART00000147293 N/A N/A N/A N/A N/A N/A N/A 0.720±0.00 0.156±0.00 N/A N/A N/A N/A N/A
ENSDARG00000095378 ENSDART00000142725 N/A N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148352 N/A N/A N/A 2.656±0.71 N/A N/A N/A 0.460±0.09 N/A N/A 0.795±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000204179 ENST00000374218 N/A N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A 0.312±0.00 N/A 3.329±0.00
ENST00000374339 N/A N/A 0.220±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.680±0.00 N/A N/A
ENST00000374342 0.020±0.00 0.262±0.00 N/A 1.613±0.00 0.333±0.00 0.252±0.00 1.108±0.00 0.899±0.00 N/A 0.251±0.00 0.471±0.19 0.826±0.30 0.108±0.00 1.941±0.00
ENST00000374346 N/A N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 0.265±0.00 N/A 0.087±0.00 N/A N/A
ENST00000395721 N/A N/A N/A 0.341±0.00 N/A 0.110±0.00 N/A N/A N/A N/A N/A 0.543±0.00 N/A N/A
ENST00000395722 N/A N/A 0.297±0.00 1.654±0.00 0.245±0.14 0.164±0.00 0.768±0.00 N/A N/A N/A N/A N/A 0.043±0.00 N/A
ENST00000395725 N/A N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506881 N/A N/A N/A N/A N/A N/A N/A N/A 1.918±0.00 N/A N/A N/A N/A N/A
ENST00000508357 N/A N/A N/A N/A 0.360±0.00 0.559±0.00 N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A
ENST00000508602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513266 N/A N/A N/A N/A N/A N/A N/A 0.516±0.00 N/A N/A N/A N/A N/A N/A
ENST00000513756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266524 ENST00000580279 2.213±0.00 1.712±0.00 N/A 1.728±1.27 5.351±4.86 0.641±0.48 0.281±0.00 0.309±0.00 0.036±0.01 6.015±5.02 0.372±0.24 0.143±0.10 0.078±0.04 5.569±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021940 ENSMUST00000022508 0.017±0.00 0.096±0.04 0.026±0.01 0.036±0.01 0.027±0.00 0.041±0.00 0.024±0.00 0.021±0.01 0.046±0.03 0.211±0.05 0.010±0.00 0.107±0.05 0.161±0.05 23.308±9.96
ENSMUSG00000021943 ENSMUST00000168727 45.771±29.71 50.280±4.45 14.938±0.28 2.448±0.49 23.850±9.21 10.952±0.43 2.336±1.10 9.315±1.61 6.184±3.34 13.945±0.45 1.341±0.27 26.053±11.50 0.373±0.57 0.620±0.55

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