C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulatory factor X, 1b (influences HLA class II expression)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000148382 rfx1b-001 ENSDARG00000075904 7955 - 1:54655317-54674075 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000148382
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000148382 2.257±0.32 4.245±0.72 2.052±1.48 0.785±0.00 2.647±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016Z CIL_00016Z_0001 CGP 1:54636220-54674075

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005488 IEA binding
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002444 Rfx2-201 protein_coding Mus_musculus 1e-26 126
ENSMUST00000086801 Rfx2-202 protein_coding Mus_musculus 1e-26 126

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