C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 47
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000076839 TRIM47 (55 of 90) 7955 + 15:505347-515647 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000102274 TRIM47 (55 of 90)-001 505347-515647 protein_coding
  ENSDART00000102275 TRIM47 (55 of 90)-201 505347-515644 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000102274ENSDART00000102275
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000102274 0.253±0.12 0.266±0.22 1.772±0.95 0.110±0.00 0.162±0.00
ENSDART00000102275 0.417±0.25 0.266±0.22 2.134±0.00 0.110±0.00 0.162±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IC CIL_0004IC_0001 CGP 15:454577-541027

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132481 TRIM47 tripartite motif containing 47 protein_coding Homo_sapiens
ENSMUSG00000020773 Trim47 tripartite motif-containing 47 protein_coding Mus_musculus

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