C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004IC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007264-ENSDARG00000007264 CGP 7955 15:454577-541027
GeneTranscriptPositionBiotype
ENSDARG00000007264 (gbas)
glioblastoma amplified sequence 		ENSDART00000122582 (gbas-201) 454607-541027 protein_coding
ENSDART00000155682 (gbas-001) 454577-464301 protein_coding
ENSDARG00000007722 (nudt8)
nudix (nucleoside diphosphate linked moiety X)-type motif 8 		ENSDART00000015634 (nudt8-201) 498736-502650 protein_coding
ENSDART00000155472 (nudt8-001) 498731-504904 protein_coding
ENSDARG00000019772 ()
complement component 2 		ENSDART00000018062 () 477385-495444 protein_coding
ENSDARG00000040314 (psph)
phosphoserine phosphatase 		ENSDART00000058993 (psph-001) 464034-470501 protein_coding
ENSDARG00000076839 (TRIM47 (55 of 90))
tripartite motif containing 47 		ENSDART00000102274 (TRIM47 (55 of 90)-001) 505347-515647 protein_coding
ENSDART00000102275 (TRIM47 (55 of 90)-201) 505347-515644 protein_coding
ENSDARG00000084686 (snoU2_19)
Small nucleolar RNA U2-19 		ENSDART00000120086 (snoU2_19.1-201) 471472-471533 snoRNA
ENSDARG00000097848 (si:ch73-111k20.3)
si:ch73-111k20.3 		ENSDART00000157158 (si:ch73-111k20.3-001) 470509-476203 lincRNA
CIL_0004IC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029432-ENSMUSG00000029446 CGP 10090 5:129725063-129787252
GeneTranscriptPositionBiotype
ENSMUSG00000029432 (Gbas)
glioblastoma amplified sequence 		ENSMUST00000086046 (Gbas-001) 129725063-129758327 protein_coding
ENSMUST00000124342 (Gbas-002) 129725099-129758250 nonsense_mediated_decay
ENSMUST00000135160 (Gbas-003) 129753230-129754863 processed_transcript
ENSMUST00000137604 (Gbas-004) 129752658-129757202 retained_intron
ENSMUST00000186265 (Gbas-201) 129725099-129758250 protein_coding
ENSMUSG00000029446 (Psph)
phosphoserine phosphatase 		ENSMUST00000031399 (Psph-001) 129765558-129787204 protein_coding
ENSMUST00000118268 (Psph-004) 129765558-129771615 protein_coding
ENSMUST00000136280 (Psph-003) 129769243-129771155 processed_transcript
ENSMUST00000136507 (Psph-002) 129770700-129786975 protein_coding
ENSMUST00000178244 (Psph-005) 129776866-129787252 retained_intron
ENSMUSG00000086916 (Gm15903)
predicted gene 15903 		ENSMUST00000155796 (Gm15903-001) 129727046-129728385 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IC_0001ENSDARG00000007264ENSDART00000122582ENSDART00000155682ENSDARG00000007722ENSDART00000015634ENSDART00000155472ENSDARG00000019772ENSDART00000018062ENSDARG00000040314ENSDART00000058993ENSDARG00000076839ENSDART00000102274ENSDART00000102275ENSDARG00000084686ENSDART00000120086ENSDARG00000097848ENSDART00000157158CIL_0004IC_0002ENSMUSG00000029432ENSMUST00000086046ENSMUST00000124342ENSMUST00000135160ENSMUST00000137604ENSMUST00000186265ENSMUSG00000029446ENSMUST00000031399ENSMUST00000118268ENSMUST00000136280ENSMUST00000136507ENSMUST00000178244ENSMUSG00000086916ENSMUST00000155796
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IC_0001ENSDARG00000007264ENSDART00000122582ENSDART00000155682ENSDARG00000007722ENSDART00000015634ENSDART00000155472ENSDARG00000019772ENSDART00000018062ENSDARG00000040314ENSDART00000058993ENSDARG00000076839ENSDART00000102274ENSDART00000102275ENSDARG00000084686ENSDART00000120086ENSDARG00000097848ENSDART00000157158CIL_0004IC_0002ENSMUSG00000029432ENSMUST00000086046ENSMUST00000124342ENSMUST00000137604ENSMUSG00000029446ENSMUST00000031399ENSMUST00000136280ENSMUST00000136507ENSMUST00000178244ENSMUSG00000086916ENSMUST00000155796
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007264 ENSDART00000122582 N/A N/A N/A 22.419±21.31 N/A N/A 56.502±1.24 14.322±0.00 3.213±0.00 N/A 26.074±0.00 N/A N/A N/A
ENSDART00000155682 N/A N/A N/A 37.725±4.27 N/A N/A 139.450±8.18 N/A N/A N/A 128.229±0.00 N/A N/A N/A
ENSDARG00000007722 ENSDART00000015634 N/A N/A N/A 0.826±0.00 N/A N/A 9.429±5.05 12.099±4.09 N/A N/A 4.095±0.00 N/A N/A N/A
ENSDART00000155472 N/A N/A N/A 1.470±0.35 N/A N/A 5.930±1.87 N/A 0.595±0.00 N/A 2.126±0.00 N/A N/A N/A
ENSDARG00000019772 ENSDART00000018062 N/A N/A N/A 0.249±0.23 N/A N/A 0.918±0.30 37.529±0.00 52.529±0.00 N/A 2.473±0.00 N/A N/A N/A
ENSDARG00000040314 ENSDART00000058993 N/A N/A N/A 3.229±0.56 N/A N/A 31.173±5.53 9.952±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000076839 ENSDART00000102274 N/A N/A N/A 0.253±0.12 N/A N/A 0.266±0.22 1.772±0.95 0.110±0.00 N/A 0.162±0.00 N/A N/A N/A
ENSDART00000102275 N/A N/A N/A 0.417±0.25 N/A N/A 0.266±0.22 2.134±0.00 0.110±0.00 N/A 0.162±0.00 N/A N/A N/A
ENSDARG00000084686 ENSDART00000120086 N/A N/A N/A N/A N/A N/A N/A N/A 252.583±0.00 N/A N/A N/A N/A N/A
ENSDARG00000097848 ENSDART00000157158 N/A N/A N/A 2.301±1.67 N/A N/A 4.309±0.67 4.635±0.00 2.297±0.00 N/A 3.581±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029432 ENSMUST00000086046 13.482±1.14 4.810±0.58 16.835±4.94 11.144±3.45 9.405±3.72 7.891±1.09 58.444±13.66 9.610±2.72 7.112±0.84 7.334±0.17 153.745±21.56 10.660±7.40 11.429±3.17 2.274±0.86
ENSMUST00000124342 26.461±3.09 34.943±5.38 17.437±1.39 13.828±0.99 30.750±10.29 23.704±3.97 183.633±6.07 34.465±1.90 6.044±1.84 21.485±1.34 64.387±12.34 19.144±5.54 11.812±3.56 5.277±0.84
ENSMUST00000135160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137604 N/A N/A N/A N/A N/A N/A N/A N/A 2.255±0.00 N/A N/A 11.926±1.77 N/A N/A
ENSMUST00000186265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029446 ENSMUST00000031399 14.323±4.06 9.131±1.32 5.232±0.94 7.793±2.08 12.502±2.81 3.558±0.83 2.257±0.50 9.408±1.07 13.545±11.16 4.856±0.67 4.180±0.25 5.683±1.23 21.642±15.50 8.887±0.71
ENSMUST00000118268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136280 N/A N/A N/A N/A N/A N/A N/A 8.844±1.40 N/A N/A N/A N/A N/A N/A
ENSMUST00000136507 N/A 11.408±1.99 N/A N/A N/A N/A 1.835±0.25 N/A N/A N/A 3.303±0.77 4.593±0.96 N/A N/A
ENSMUST00000178244 1.012±0.01 1.498±0.18 0.598±0.13 0.561±0.01 1.212±0.40 N/A 0.243±0.05 0.632±0.00 0.397±0.11 0.625±0.09 0.359±0.05 1.080±0.21 N/A 0.744±0.11
ENSMUSG00000086916 ENSMUST00000155796 0.257±0.00 0.586±0.15 0.376±0.00 0.174±0.07 0.687±0.11 0.462±0.00 0.596±0.38 0.680±0.42 0.258±0.17 N/A 0.355±0.00 1.399±0.68 0.429±0.15 0.817±0.65

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