C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neighbor of brca1 gene 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000077297 nbr1 7955 + 12:28784764-28800889 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000114556 nbr1-201 28784884-28799843 protein_coding
  ENSDART00000133048 nbr1-001 28784764-28800889 protein_coding
  ENSDART00000138141 nbr1-002 28784791-28800889 retained_intron
  ENSDART00000142025 nbr1-003 28790024-28791620 processed_transcript

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000133048ENSDART00000138141
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000133048 12.747±4.64 20.884±15.17 20.127±10.61 0.997±0.00 4.696±0.00
ENSDART00000138141 4.536±1.44 2.754±0.43 N/A 0.233±0.00 2.346±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KX CIL_0000KX_0001 CGP 12:28784764-28808063

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000188554 NBR1 neighbor of BRCA1 gene 1 protein_coding Homo_sapiens
ENSMUSG00000017119 Nbr1 neighbor of Brca1 gene 1 protein_coding Mus_musculus

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