C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187325 TAF9B 9606 - X:78129748-78139706 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341864 TAF9B-001 78129748-78139706 protein_coding
  ENST00000480681 TAF9B-002 78131721-78139622 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341864ENST00000480681
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341864 8.425±0.00 4.665±0.00 2.664±0.00 9.377±1.82 4.637±1.98 5.458±2.32 4.198±1.48 3.767±0.93 3.257±2.19 2.753±0.66 3.328±2.57 2.588±1.14 2.577±0.71 5.041±3.88
ENST00000480681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.988±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YZ CIL_0001YZ_0001 CGP X:78065188-78139706

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IC transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005669 IDA transcription factor TFIID complex
GO:0006352 IEA DNA-templated transcription, initiation
GO:0030307 IMP positive regulation of cell growth
GO:0033276 IDA transcription factor TFTC complex
GO:0043066 IMP negative regulation of apoptotic process
GO:0046982 IEA protein heterodimerization activity
GO:0050821 IDA protein stabilization
GO:1902166 IC negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077870 taf9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_coding Danio_rerio
ENSMUSG00000047242 Taf9b TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_coding Mus_musculus

Loading