C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family A (ABC1), member 1B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000079009 abca1b 7955 + 14:6395285-6484954 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000051556 abca1b-201 6395639-6484954 protein_coding
  ENSDART00000148461 abca1b-001 6433934-6483918 protein_coding
  ENSDART00000149393 abca1b-003 6395287-6410952 protein_coding
  ENSDART00000149783 abca1b-002 6395285-6411813 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000051556ENSDART00000148461
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000051556 1.032±0.52 1.559±1.22 1.861±0.26 2.499±0.00 0.256±0.00
ENSDART00000148461 N/A 1.211±0.44 0.890±0.00 0.794±0.00 0.414±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0016887 IEA ATPase activity
GO:0017111 IEA nucleoside-triphosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165029 ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 protein_coding Homo_sapiens
ENSMUSG00000015243 Abca1 ATP-binding cassette, sub-family A (ABC1), member 1 protein_coding Mus_musculus

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