C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: actin binding LIM protein family, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000088168 ablim3 7955 - 14:35765305-35926930 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000125109 ablim3-203 35788464-35805921 protein_coding
  ENSDART00000134249 ablim3-002 35765926-35767920 retained_intron
  ENSDART00000141157 ablim3-001 35765305-35926930 protein_coding
  ENSDART00000147084 ablim3-003 35767943-35787514 retained_intron
  ENSDART00000150358 ablim3-004 35787457-35831101 protein_coding
  ENSDART00000150413 ablim3-005 35765857-35926558 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000125109ENSDART00000134249ENSDART00000141157ENSDART00000150358
Transcript ID Brain Heart Kidney Muscle
ENSDART00000125109 N/A 0.770±0.00 N/A N/A
ENSDART00000134249 N/A N/A 0.372±0.00 N/A
ENSDART00000141157 1.090±0.46 9.879±9.17 0.791±0.58 0.900±0.00
ENSDART00000150358 N/A 0.328±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001F8 CIL_0001F8_0001 CGP 14:35692835-35926930
CIL_0001F7 CIL_0001F7_0001 CGP 14:35765305-35953405

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0007010 IEA cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000173210 ABLIM3 actin binding LIM protein family, member 3 protein_coding Homo_sapiens
ENSMUSG00000032735 Ablim3 actin binding LIM protein family, member 3 protein_coding Mus_musculus

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