C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001F8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000089162-ENSDARG00000088168 CGP 7955 14:35692835-35926930
GeneTranscriptPositionBiotype
ENSDARG00000088168 (ablim3)
actin binding LIM protein family, member 3
ENSDART00000125109 (ablim3-203) 35788464-35805921 protein_coding
ENSDART00000134249 (ablim3-002) 35765926-35767920 retained_intron
ENSDART00000141157 (ablim3-001) 35765305-35926930 protein_coding
ENSDART00000147084 (ablim3-003) 35767943-35787514 retained_intron
ENSDART00000150358 (ablim3-004) 35787457-35831101 protein_coding
ENSDART00000150413 (ablim3-005) 35765857-35926558 protein_coding
ENSDARG00000089162 (afap1l1a)
actin filament associated protein 1-like 1a
ENSDART00000128869 (afap1l1a-001) 35692835-35764369 protein_coding
ENSDART00000144547 (afap1l1a-002) 35712397-35736213 protein_coding
ENSDART00000156993 (afap1l1a-202) 35693471-35721801 protein_coding
CIL_0001F8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033032-ENSMUSG00000032735 CGP 10090 18:61730261-61911852
GeneTranscriptPositionBiotype
ENSMUSG00000032735 (Ablim3)
actin binding LIM protein family, member 3
ENSMUST00000049378 (Ablim3-201) 61799395-61911824 protein_coding
ENSMUST00000166783 (Ablim3-202) 61799395-61911852 protein_coding
ENSMUSG00000033032 (Afap1l1)
actin filament associated protein 1-like 1
ENSMUST00000120472 (Afap1l1-001) 61730261-61786702 protein_coding
ENSMUST00000147278 (Afap1l1-002) 61730939-61786660 retained_intron
ENSMUST00000154876 (Afap1l1-003) 61730261-61786611 nonsense_mediated_decay
ENSMUSG00000098702 (1500015A07Rik)
RIKEN cDNA 1500015A07 gene
ENSMUST00000184181 (1500015A07Rik-002) 61726390-61728254 antisense
ENSMUST00000184530 (1500015A07Rik-003) 61734357-61735909 antisense
ENSMUST00000184678 (1500015A07Rik-001) 61726433-61735917 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001F8_0001ENSDARG00000088168ENSDART00000125109ENSDART00000134249ENSDART00000141157ENSDART00000147084ENSDART00000150358ENSDART00000150413ENSDARG00000089162ENSDART00000128869ENSDART00000144547ENSDART00000156993CIL_0001F8_0002ENSMUSG00000032735ENSMUST00000049378ENSMUST00000166783ENSMUSG00000033032ENSMUST00000120472ENSMUST00000147278ENSMUST00000154876ENSMUSG00000098702ENSMUST00000184181ENSMUST00000184530ENSMUST00000184678
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001F8_0001ENSDARG00000088168ENSDART00000125109ENSDART00000134249ENSDART00000141157ENSDART00000150358ENSDARG00000089162ENSDART00000128869CIL_0001F8_0002ENSMUSG00000032735ENSMUST00000049378ENSMUST00000166783ENSMUSG00000033032ENSMUST00000120472ENSMUST00000147278ENSMUST00000154876ENSMUSG00000098702ENSMUST00000184181
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000088168 ENSDART00000125109 N/A N/A N/A N/A N/A N/A 0.770±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134249 N/A N/A N/A N/A N/A N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000141157 N/A N/A N/A 1.090±0.46 N/A N/A 9.879±9.17 0.791±0.58 N/A N/A 0.900±0.00 N/A N/A N/A
ENSDART00000147084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150358 N/A N/A N/A N/A N/A N/A 0.328±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000089162 ENSDART00000128869 N/A N/A N/A 0.240±0.00 N/A N/A 0.571±0.54 10.890±10.41 0.014±0.00 N/A N/A N/A N/A N/A
ENSDART00000144547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032735 ENSMUST00000049378 N/A 2.270±0.09 N/A 4.187±3.37 N/A 0.323±0.07 N/A N/A N/A N/A 0.795±0.00 0.460±0.15 0.053±0.00 N/A
ENSMUST00000166783 N/A N/A N/A 7.376±4.54 1.623±0.00 0.218±0.07 N/A N/A 0.223±0.24 N/A N/A N/A 0.036±0.01 0.133±0.04
ENSMUSG00000033032 ENSMUST00000120472 13.107±4.02 5.210±1.66 4.345±0.17 3.905±1.87 6.792±2.78 4.803±2.30 23.573±1.77 8.850±1.06 1.585±0.89 70.997±9.44 16.540±0.81 4.831±2.04 16.105±15.66 1.121±0.53
ENSMUST00000147278 2.139±0.53 1.267±0.31 N/A 6.133±0.00 2.008±0.00 1.723±0.00 N/A N/A 0.422±0.10 13.551±2.01 N/A 2.605±1.13 16.065±8.10 1.488±1.14
ENSMUST00000154876 N/A N/A N/A N/A 1.389±0.00 N/A N/A 1.745±0.00 N/A N/A N/A 2.666±0.49 16.271±11.38 0.857±0.33
ENSMUSG00000098702 ENSMUST00000184181 N/A N/A 3.076±0.73 3.684±1.09 1.886±0.00 N/A N/A N/A 1.978±0.94 N/A N/A 1.709±0.10 N/A 1.246±0.25
ENSMUST00000184530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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