C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syndecan 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000088962 sdc3 7955 + 19:44700468-44782072 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000123250 sdc3-201 44700468-44782072 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000123250
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000123250 9.707±2.57 1.796±0.85 2.550±0.69 0.211±0.00 0.970±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AF CIL_0002AF_0001 CGP 19:44640552-44782072

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008092 IEA cytoskeletal protein binding
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0055113 IMP epiboly involved in gastrulation with mouth forming second

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000162512 SDC3 syndecan 3 protein_coding Homo_sapiens
ENSMUSG00000025743 Sdc3 syndecan 3 protein_coding Mus_musculus

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