C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: R3H domain and coiled-coil containing 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000089243 r3hcc1l 7955 + 1:55487469-55498014 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000122551 r3hcc1l-201 55489774-55498014 protein_coding
  ENSDART00000152528 r3hcc1l-001 55487469-55497873 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000122551ENSDART00000152528
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000122551 8.972±2.68 43.328±32.42 4.679±0.00 1.548±0.00 5.871±0.00
ENSDART00000152528 4.023±1.47 4.037±0.00 7.113±0.00 N/A 4.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BX CIL_0001BX_0001 CGP 1:55473932-55498014

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0004535 IEA poly(A)-specific ribonuclease activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006402 IEA mRNA catabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166024 R3HCC1L R3H domain and coiled-coil containing 1-like protein_coding Homo_sapiens
ENSMUSG00000025184 R3hcc1l R3H domain and coiled-coil containing 1 like protein_coding Mus_musculus

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