C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: R3H domain and coiled-coil containing 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166024 R3HCC1L 9606 + 10:98134624-98244897 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298999 R3HCC1L-001 98134671-98244897 protein_coding
  ENST00000314594 R3HCC1L-201 98163287-98244894 protein_coding
  ENST00000370584 R3HCC1L-202 98134624-98244894 protein_coding
  ENST00000370586 R3HCC1L-002 98162883-98244349 protein_coding
  ENST00000612478 R3HCC1L-203 98163287-98244894 protein_coding
  ENST00000613938 R3HCC1L-204 98163287-98244892 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000298999ENST00000314594ENST00000370584ENST00000612478ENST00000613938
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000298999 0.976±0.00 1.209±0.00 0.715±0.12 N/A 1.188±0.38 0.538±0.00 N/A 0.852±0.63 0.438±0.00 0.277±0.00 1.387±0.46 0.457±0.12 3.012±0.00
ENST00000314594 1.252±0.00 N/A 1.000±0.00 0.775±0.19 1.506±0.64 0.549±0.00 2.073±0.00 0.530±0.00 2.583±0.83 0.684±0.00 1.050±0.55 0.706±0.14 5.565±2.38
ENST00000370584 N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 0.742±0.00 N/A 0.701±0.00 0.565±0.15 1.558±0.00
ENST00000612478 N/A 0.814±0.00 N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613938 0.876±0.00 3.946±0.00 N/A 1.116±0.00 0.936±0.00 N/A 3.648±0.00 1.402±0.00 N/A 0.812±0.00 2.002±1.19 1.131±0.01 5.618±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BX CIL_0001BX_0002 CGP 10:97865000-98244897
CIL_00054Z CIL_00054Z_0001 CGP 10:98134624-98268250

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0035145 IDA exon-exon junction complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089243 r3hcc1l R3H domain and coiled-coil containing 1-like protein_coding Danio_rerio
ENSMUSG00000025184 R3hcc1l R3H domain and coiled-coil containing 1 like protein_coding Mus_musculus

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