C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine/arginine-rich splicing factor 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000090077 srsf4 7955 - 19:17154639-17164226 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000105219 srsf4-003 17154652-17160453 retained_intron
  ENSDART00000122914 srsf4-201 17154643-17164186 protein_coding
  ENSDART00000125200 srsf4-001 17154639-17164226 protein_coding
  ENSDART00000137823 srsf4-002 17161230-17164213 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000105219ENSDART00000122914ENSDART00000125200ENSDART00000137823
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000105219 21.079±4.63 11.111±4.36 21.054±1.30 1.539±0.00 5.847±0.00
ENSDART00000122914 32.812±6.02 79.377±14.20 91.257±19.04 0.807±0.00 N/A
ENSDART00000125200 24.326±3.53 15.067±0.35 20.817±0.00 N/A 5.982±0.00
ENSDART00000137823 14.126±1.74 7.152±0.76 N/A 1.676±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PY CIL_0003PY_0001 CGP 19:17148138-17164226

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000116350 SRSF4 serine/arginine-rich splicing factor 4 protein_coding Homo_sapiens
ENSMUSG00000028911 Srsf4 serine/arginine-rich splicing factor 4 protein_coding Mus_musculus

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