C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine/arginine-rich splicing factor 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028911 Srsf4 10090 + 4:131873617-131901706 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030743 Srsf4-002 131885208-131901706 protein_coding
  ENSMUST00000053819 Srsf4-001 131873617-131901706 protein_coding
  ENSMUST00000129966 Srsf4-003 131873816-131892144 processed_transcript
  ENSMUST00000134943 Srsf4-004 131884295-131897834 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastLiverMuscleOvaryPlacentaTestisENSMUST00000030743ENSMUST00000053819ENSMUST00000134943
Transcript ID Adrenal Bladder Brain Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000030743 N/A N/A N/A 1.527±0.00 N/A N/A 5.781±0.00 N/A N/A
ENSMUST00000053819 2.150±0.32 3.531±0.17 9.015±2.53 N/A 6.386±2.68 1.840±0.38 5.059±4.21 7.239±3.79 4.581±0.00
ENSMUST00000134943 N/A 8.836±0.09 40.024±0.00 3.608±0.00 12.699±0.00 3.509±0.42 54.919±0.00 19.697±12.23 22.589±11.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0002 VISTA 4:131775516-132379227

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0005634 IEA nucleus
GO:0044822 IEA poly(A) RNA binding
GO:0048025 IEA negative regulation of mRNA splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090077 srsf4 serine/arginine-rich splicing factor 4 protein_coding Danio_rerio
ENSG00000116350 SRSF4 serine/arginine-rich splicing factor 4 protein_coding Homo_sapiens

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