C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcitonin receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415529 CALCR-004 ENSG00000004948 9606 - 7:93426356-93486981 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000415529
Transcript ID Breast
ENST00000415529 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E8 CIL_0008E8_0001 VISTA 7:92945640-93549905
CIL_0004SU CIL_0004SU_0002 CGP 7:93232340-93574730

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IDA receptor activity
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0004948 IEA calcitonin receptor activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 IDA:IEA G-protein coupled receptor signaling pathway
GO:0007189 NAS adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007204 IDA positive regulation of cytosolic calcium ion concentration
GO:0008565 IDA protein transporter activity
GO:0015031 IDA protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030819 IDA positive regulation of cAMP biosynthetic process
GO:0031623 IDA receptor internalization
GO:0032841 IPI calcitonin binding
GO:0045762 IDA positive regulation of adenylate cyclase activity
GO:0051384 IDA response to glucocorticoid
GO:0072659 IDA protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170266 Calcr-202 protein_coding Mus_musculus 0 527
ENSMUST00000168592 Calcr-201 protein_coding Mus_musculus 0 527
ENSMUST00000075644 Calcr-001 protein_coding Mus_musculus 0 527
ENSMUST00000115622 Calcr-005 protein_coding Mus_musculus 0 527
ENSMUST00000171613 Calcr-003 protein_coding Mus_musculus 0 527
ENSMUST00000171396 Calcr-004 protein_coding Mus_musculus 0 411
ENSDART00000051943 calcr-201 protein_coding Danio_rerio 1e-28 132
ENSDART00000131471 calcr-001 protein_coding Danio_rerio 1e-28 132

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